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The map label for this gene is yfnA [H]

Identifier: 157371426

GI number: 157371426

Start: 3509401

End: 3510849

Strand: Reverse

Name: yfnA [H]

Synonym: Spro_3189

Alternate gene names: 157371426

Gene position: 3510849-3509401 (Counterclockwise)

Preceding gene: 157371427

Following gene: 157371425

Centisome position: 64.43

GC content: 52.04

Gene sequence:

>1449_bases
ATGAGCCAATCTGTGGAGAATAAAACACATCTAAAAAAAGCCATTACCTTCAATGGTTTCTTGGGGATGGGTATTGGCTG
CGTGTTTGGTGCTTCCTGGTTGGTACTTACCGGCACCTGGCTAAGCACCGCCGGTGGCCCATCCAATGCGGCACTGGCCA
TTTTGCTCTGCCTTCTCATTGAGCTTCCCCTGGCGCTGGCTTATCTGGAAGCCATCTCGGCGGTTCCGTTGGCAGGCGGA
GAGGCTGCGTATTCTTACCTTGCCTTCGGTAGTTTTGCCGCGATGATTGCCGGATGGTTCGGCGTGTTGGTTAATATCAT
TTTATGCGCCTGGGAAGCGCTGGCGATCACCACCATGCTGGGCTACCTGCTGCCTTCCATGAAGAGTGCGGCGATTCTCT
ATGAGGTCGGCGGGTTTGCGGTCAGTGCTCCATTATTGATTATCGGGCTGTTACTTGTCGCAGGGATCGGCATGATGCAG
CATCGGGGGGTAAAACTTTCATCAACGTTACAGACGGTCATTACAGTGACTGTTTTAACCCTGGTTATCGTCTCGCTGAT
TGCATGTTCATTCTATATCAACCTTGAAAATCTCAGCCCGTTACAGAGCAAACCGACCTTTGCCGGCGTGGTGGCTCTGC
TGGCGCTCCTGCCATTTTCTATTGCCGGATGGGAAACCATAGCCAAGGGGGCGGAAGAAGCCTCTGCCAGCCTAAGCCGT
AAAAAAACCGCTCTCGCTTTGATTATCTCTCTGGTCATTGCCACCTTTATGTATCTGATTACCATGCTGGTTCCTTCGGC
CATTGTGCCGTGGCAAAGCCTGATGACTATGGATATCCCCTTTGCTCATGCAGCAGAAATAGTGACAGGTACGCCAGTTT
GGGGGTTGGTATTAACGGCGGCTGCTTGCTGCGGAGTCGTGGGTGTTTATAACGCCTGTTTTTATGGTGCAACTCGTTTA
CTCATGTATATGAGCCAGGTGGGTTTAATTCCGGCCGCTTTCTCCCGGTTGCACCCGGTTTACCATACGCCAACGGTAGC
CATCCTTTTCGTTTCATTAATAGCCGCTTCTGCCTGTCTGCTGGGTAAAGCCGTGTTTCTCCCACTGGTCACCGTGGCCG
CTTTTTCCTATATCGTCTTGTGGGGGTCAACGCTGTTTTCCGTGATGCGACTGCGGAAATTGCGCCCTGAGCTTCCGCGC
CCACTTCCCACTCCGGGAGGGAAATTCACCCTGGCTGTGGGGGCCATTGTGACTCTGCTTATGGCTGCGGCCATGTTGGT
TCCTGGCAGCCCGGCGTCGCTTAAGTGGCCCTATGAGCATCTTCTATTGGGTGTGCTGCTGGTGATTGGCATGATCCTCT
ATTTGTTGCGGGATAAATCTGTTTCCGGAGAAGAACAGGCCAAATTGATACTGGAAAATATTCCTACCGAAATAGTGAAA
AAAGACTGA

Upstream 100 bases:

>100_bases
CTCAAAGGCGAGGGAGCCAAAATTCTGGCTCCTCCGCGTAATGCCGTCAGATATCACTTCTACTTTTAGTCGCCATCCGT
ACTTCACTAAGGAGTTTGTT

Downstream 100 bases:

>100_bases
CTACTCAATATAGGCATTCGGATTAATTCTGTACTCATATCGATGAAAATACCCTGAATGTATCTTGTGAAATAAAGATA
ATTAAGAGGTTAAAAATGGA

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MSQSVENKTHLKKAITFNGFLGMGIGCVFGASWLVLTGTWLSTAGGPSNAALAILLCLLIELPLALAYLEAISAVPLAGG
EAAYSYLAFGSFAAMIAGWFGVLVNIILCAWEALAITTMLGYLLPSMKSAAILYEVGGFAVSAPLLIIGLLLVAGIGMMQ
HRGVKLSSTLQTVITVTVLTLVIVSLIACSFYINLENLSPLQSKPTFAGVVALLALLPFSIAGWETIAKGAEEASASLSR
KKTALALIISLVIATFMYLITMLVPSAIVPWQSLMTMDIPFAHAAEIVTGTPVWGLVLTAAACCGVVGVYNACFYGATRL
LMYMSQVGLIPAAFSRLHPVYHTPTVAILFVSLIAASACLLGKAVFLPLVTVAAFSYIVLWGSTLFSVMRLRKLRPELPR
PLPTPGGKFTLAVGAIVTLLMAAAMLVPGSPASLKWPYEHLLLGVLLVIGMILYLLRDKSVSGEEQAKLILENIPTEIVK
KD

Sequences:

>Translated_482_residues
MSQSVENKTHLKKAITFNGFLGMGIGCVFGASWLVLTGTWLSTAGGPSNAALAILLCLLIELPLALAYLEAISAVPLAGG
EAAYSYLAFGSFAAMIAGWFGVLVNIILCAWEALAITTMLGYLLPSMKSAAILYEVGGFAVSAPLLIIGLLLVAGIGMMQ
HRGVKLSSTLQTVITVTVLTLVIVSLIACSFYINLENLSPLQSKPTFAGVVALLALLPFSIAGWETIAKGAEEASASLSR
KKTALALIISLVIATFMYLITMLVPSAIVPWQSLMTMDIPFAHAAEIVTGTPVWGLVLTAAACCGVVGVYNACFYGATRL
LMYMSQVGLIPAAFSRLHPVYHTPTVAILFVSLIAASACLLGKAVFLPLVTVAAFSYIVLWGSTLFSVMRLRKLRPELPR
PLPTPGGKFTLAVGAIVTLLMAAAMLVPGSPASLKWPYEHLLLGVLLVIGMILYLLRDKSVSGEEQAKLILENIPTEIVK
KD
>Mature_481_residues
SQSVENKTHLKKAITFNGFLGMGIGCVFGASWLVLTGTWLSTAGGPSNAALAILLCLLIELPLALAYLEAISAVPLAGGE
AAYSYLAFGSFAAMIAGWFGVLVNIILCAWEALAITTMLGYLLPSMKSAAILYEVGGFAVSAPLLIIGLLLVAGIGMMQH
RGVKLSSTLQTVITVTVLTLVIVSLIACSFYINLENLSPLQSKPTFAGVVALLALLPFSIAGWETIAKGAEEASASLSRK
KTALALIISLVIATFMYLITMLVPSAIVPWQSLMTMDIPFAHAAEIVTGTPVWGLVLTAAACCGVVGVYNACFYGATRLL
MYMSQVGLIPAAFSRLHPVYHTPTVAILFVSLIAASACLLGKAVFLPLVTVAAFSYIVLWGSTLFSVMRLRKLRPELPRP
LPTPGGKFTLAVGAIVTLLMAAAMLVPGSPASLKWPYEHLLLGVLLVIGMILYLLRDKSVSGEEQAKLILENIPTEIVKK
D

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI115648063, Length=345, Percent_Identity=25.5072463768116, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI115648022, Length=345, Percent_Identity=25.5072463768116, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI186910308, Length=349, Percent_Identity=25.7879656160458, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI186910306, Length=349, Percent_Identity=25.7879656160458, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI186910304, Length=349, Percent_Identity=25.7879656160458, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24668806, Length=375, Percent_Identity=23.7333333333333, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356285, Length=375, Percent_Identity=23.7333333333333, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24668802, Length=375, Percent_Identity=23.7333333333333, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50962; Mature: 50831

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSVENKTHLKKAITFNGFLGMGIGCVFGASWLVLTGTWLSTAGGPSNAALAILLCLLI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHH
ELPLALAYLEAISAVPLAGGEAAYSYLAFGSFAAMIAGWFGVLVNIILCAWEALAITTML
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLPSMKSAAILYEVGGFAVSAPLLIIGLLLVAGIGMMQHRGVKLSSTLQTVITVTVLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH
LVIVSLIACSFYINLENLSPLQSKPTFAGVVALLALLPFSIAGWETIAKGAEEASASLSR
HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKTALALIISLVIATFMYLITMLVPSAIVPWQSLMTMDIPFAHAAEIVTGTPVWGLVLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
AACCGVVGVYNACFYGATRLLMYMSQVGLIPAAFSRLHPVYHTPTVAILFVSLIAASACL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGKAVFLPLVTVAAFSYIVLWGSTLFSVMRLRKLRPELPRPLPTPGGKFTLAVGAIVTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
MAAAMLVPGSPASLKWPYEHLLLGVLLVIGMILYLLRDKSVSGEEQAKLILENIPTEIVK
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHC
KD
CC
>Mature Secondary Structure 
SQSVENKTHLKKAITFNGFLGMGIGCVFGASWLVLTGTWLSTAGGPSNAALAILLCLLI
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHH
ELPLALAYLEAISAVPLAGGEAAYSYLAFGSFAAMIAGWFGVLVNIILCAWEALAITTML
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLPSMKSAAILYEVGGFAVSAPLLIIGLLLVAGIGMMQHRGVKLSSTLQTVITVTVLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH
LVIVSLIACSFYINLENLSPLQSKPTFAGVVALLALLPFSIAGWETIAKGAEEASASLSR
HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKTALALIISLVIATFMYLITMLVPSAIVPWQSLMTMDIPFAHAAEIVTGTPVWGLVLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
AACCGVVGVYNACFYGATRLLMYMSQVGLIPAAFSRLHPVYHTPTVAILFVSLIAASACL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGKAVFLPLVTVAAFSYIVLWGSTLFSVMRLRKLRPELPRPLPTPGGKFTLAVGAIVTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
MAAAMLVPGSPASLKWPYEHLLLGVLLVIGMILYLLRDKSVSGEEQAKLILENIPTEIVK
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]