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The map label for this gene is perR [H]

Identifier: 157371288

GI number: 157371288

Start: 3359448

End: 3360320

Strand: Reverse

Name: perR [H]

Synonym: Spro_3048

Alternate gene names: 157371288

Gene position: 3360320-3359448 (Counterclockwise)

Preceding gene: 157371291

Following gene: 157371285

Centisome position: 61.67

GC content: 59.22

Gene sequence:

>873_bases
ATGTTAAATGACTCGATCCCACTGCACATTCTGCCGACCTTTGTGATTGCCGCCCGGTTAGAGAATTTGCGCGCTACTGC
CCTGCAAGTACATCTTACCCATGGTGCCGTCAGCCAGCAGATCCAACAGCTCGAACGGGCAATCGGCTGCCCGCTGTTTG
AACGGCAGGGGCGCGGGCTGCGCCTGAATAGCGCCGGACGTGAGCTGTTGGCCGTTGCCGAACCGGCGCTGCAGGCATTG
CAGCAAGGCGTCAGCCGGGTCAGGAGGATTGCGCAAAGTCAGGCTCTGCGTATCAGCGTGCTGCCCTCTTTTGCGCATTA
CTGGTTAATGCCGCGTCTGCCATCTTTTCATACGGCCTGTGCCGATATTGCGTTGGATATCGACGCCTCGCTGGTAGTGC
AGGATCTGGTGCGCAAAGGGTTTGATGCGGCCATCCGCCTCGGCAATGGTCAATGGGCAGAGATGCAGGCACAGTGGATT
GCCTCCGGAGAGGTGGTGCCGGTGGCTACCCCGGCGCTGGCCGACCAGTGGCAGGCAGCATTTGACCGTGGCGCATCAGG
CATACCGCTGTTGGAACATGATGTTACGCCGTGGCGTAGCTGGTTCACTGCGCATCAGCAGGTGGAGTCCGGCCGCCCCT
TGGCGTTATTCAATGATGCGGGATTGTTGATCCGCGCGGCTGAGCAAGGGTTTGGCATCGCGCTGGTGAAAAAACTACTG
GTGAGTGATGCGTTGGCAGAGGGCCGCTTGACCGCACTGGCACCGGCACGACATCTTGATCAGATAGACTTTTATCTGGT
TTGGCCGCAAACCGCCGGATTGACGCCGGCGGTCGAAGCATTATTGCACTGGTTGCAGCGGAAACTGGCCTGA

Upstream 100 bases:

>100_bases
CGCTGACTCCAGATGTAAGGGGCATGAGTGACAGCCTAGAACATTTGCTTTGTGGCGAAAATCGATGAAAAATGGCCTTT
TTGGATAGTCTGGCTAACCA

Downstream 100 bases:

>100_bases
GTTTAACGGCGTAGCCATTGCGGTTGTGAACTGCCAAGGGTTGTCGCAGGCAATGCCCAGAGCAGTGCTGTGCCGTTCAA
CCGTAGCGGCGCGATAAGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Peroxide resistance protein perR [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLNDSIPLHILPTFVIAARLENLRATALQVHLTHGAVSQQIQQLERAIGCPLFERQGRGLRLNSAGRELLAVAEPALQAL
QQGVSRVRRIAQSQALRISVLPSFAHYWLMPRLPSFHTACADIALDIDASLVVQDLVRKGFDAAIRLGNGQWAEMQAQWI
ASGEVVPVATPALADQWQAAFDRGASGIPLLEHDVTPWRSWFTAHQQVESGRPLALFNDAGLLIRAAEQGFGIALVKKLL
VSDALAEGRLTALAPARHLDQIDFYLVWPQTAGLTPAVEALLHWLQRKLA

Sequences:

>Translated_290_residues
MLNDSIPLHILPTFVIAARLENLRATALQVHLTHGAVSQQIQQLERAIGCPLFERQGRGLRLNSAGRELLAVAEPALQAL
QQGVSRVRRIAQSQALRISVLPSFAHYWLMPRLPSFHTACADIALDIDASLVVQDLVRKGFDAAIRLGNGQWAEMQAQWI
ASGEVVPVATPALADQWQAAFDRGASGIPLLEHDVTPWRSWFTAHQQVESGRPLALFNDAGLLIRAAEQGFGIALVKKLL
VSDALAEGRLTALAPARHLDQIDFYLVWPQTAGLTPAVEALLHWLQRKLA
>Mature_290_residues
MLNDSIPLHILPTFVIAARLENLRATALQVHLTHGAVSQQIQQLERAIGCPLFERQGRGLRLNSAGRELLAVAEPALQAL
QQGVSRVRRIAQSQALRISVLPSFAHYWLMPRLPSFHTACADIALDIDASLVVQDLVRKGFDAAIRLGNGQWAEMQAQWI
ASGEVVPVATPALADQWQAAFDRGASGIPLLEHDVTPWRSWFTAHQQVESGRPLALFNDAGLLIRAAEQGFGIALVKKLL
VSDALAEGRLTALAPARHLDQIDFYLVWPQTAGLTPAVEALLHWLQRKLA

Specific function: Apparent regulatory gene involved in peroxide resistance in stationary phase [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=285, Percent_Identity=29.1228070175439, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1789173, Length=291, Percent_Identity=28.1786941580756, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788706, Length=288, Percent_Identity=26.0416666666667, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI145693193, Length=291, Percent_Identity=26.8041237113402, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787128, Length=283, Percent_Identity=24.0282685512367, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI157672245, Length=166, Percent_Identity=30.7228915662651, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787589, Length=276, Percent_Identity=24.2753623188406, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31784; Mature: 31784

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDSIPLHILPTFVIAARLENLRATALQVHLTHGAVSQQIQQLERAIGCPLFERQGRGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCCE
RLNSAGRELLAVAEPALQALQQGVSRVRRIAQSQALRISVLPSFAHYWLMPRLPSFHTAC
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCHHHHH
ADIALDIDASLVVQDLVRKGFDAAIRLGNGQWAEMQAQWIASGEVVPVATPALADQWQAA
HHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHH
FDRGASGIPLLEHDVTPWRSWFTAHQQVESGRPLALFNDAGLLIRAAEQGFGIALVKKLL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCHHHHHHHH
VSDALAEGRLTALAPARHLDQIDFYLVWPQTAGLTPAVEALLHWLQRKLA
HHHHHHCCCCHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNDSIPLHILPTFVIAARLENLRATALQVHLTHGAVSQQIQQLERAIGCPLFERQGRGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCCE
RLNSAGRELLAVAEPALQALQQGVSRVRRIAQSQALRISVLPSFAHYWLMPRLPSFHTAC
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCHHHHH
ADIALDIDASLVVQDLVRKGFDAAIRLGNGQWAEMQAQWIASGEVVPVATPALADQWQAA
HHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHH
FDRGASGIPLLEHDVTPWRSWFTAHQQVESGRPLALFNDAGLLIRAAEQGFGIALVKKLL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCHHHHHHHH
VSDALAEGRLTALAPARHLDQIDFYLVWPQTAGLTPAVEALLHWLQRKLA
HHHHHHCCCCHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]