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The map label for this gene is tas [H]

Identifier: 157371222

GI number: 157371222

Start: 3278594

End: 3280219

Strand: Reverse

Name: tas [H]

Synonym: Spro_2982

Alternate gene names: 157371222

Gene position: 3280219-3278594 (Counterclockwise)

Preceding gene: 157371223

Following gene: 157371221

Centisome position: 60.2

GC content: 59.1

Gene sequence:

>1626_bases
GTGTTTAACCGAATCCGCGTCTCTACCAGTCTGTTTCTGTTGTTGATGACTTTTTGTGTTATGCAGTTGGCCACCAGCGG
CCTGTCGTACACCGCTTTTCGTTCCGATAACCACAACCTGAATCTGATTACCCTCGGCAGCCAGCAGCGCGATGCCCTCA
GCCTGAGCTGGGTATCGCTGTTACAGGCTCGCAATACGCTCAATCGCGCCGGAACCCGCGCGGCGCTCAAGCTGCCGCAG
GATCAGGTCAATGCGCTGATGGGCAACGCACGCAGTTCACTGCAAAAAGCCGACCTCTATTTCAACCAGTTCCTGGCGGT
ACCGCGTAACAGCGAACAGGAACAACAGCTGACGGCAACCACCAAGGCCAGCTATGACCGGCTGCGCAATACCCTTCGCG
AGCTGATTGGCTTCCTGGAGAACGATAACCTGCAGGCGTTTATGGACCAGCCGACGCAGAAAACCCAGGACCTGTTTGAA
GCCGATTTTGTCCAGTATCTGCAACTGGTGAGCGCCAACGTCAGTGAAGCCAATGCGGCGAATCAACGCTCCTTCACCCT
GTCCGGCTGGCTGGTGGCCGGTGCGGTACTGATGCTGATCGTAGTCACCGGCAGTGCCATGTGGTGGCTGCGTAACATGT
TGGTACGGCCGCTGAATATCATGCGCAGTCATTTTGACCGCATTGCCGCCGGCGATCTGGCCACGCCGATCCAGGTTTAT
GGCCGTAATGAAATCAGCCAACTGTTCGCCAGCCTGCAGCGTATGCAGCAGTCACTGATTGGCACCGTGGGTGCGGTACG
CGACGGGGCGGAATCGATCCTGATCGGCCTGCAGGAAATTTCCGAGGGCAATAACGATCTCTCTTCCCGCACCGAGCAGC
AGGCGGCCTCGCTGGAGGAAACCGCTGCCAGCATGGAGCAGTTGACCGCCACGGTGAAACAGAATGCCGATAATGCACGC
CAGGCTTCACAACTGGCGCGTGATGCTTCCACCACCGCGGCCAAGGGCGGCGAGCTGGCGGGCGACGTTGTCACCACCAT
GCACGACATTGCCAACAGTTCGCAGAAGATTGGCGCCATTACCAGCGTGATCGACGGCATTGCCTTCCAGACCAATATCC
TGGCGTTGAACGCGGCGGTTGAAGCGGCGCGTGCCGGTGAGCAGGGCAGAGGTTTTGCGGTGGTGGCCGGTGAAGTACGC
AACCTGGCGCAGCGCAGCGCGCAGGCGGCGAAAGAAATCAAAGGGCTGATCGACGAATCGGTCAGTCGCGTCAAGCAAGG
GTCGGTGCTGGTGGAAAACTCCGGTGCCACCATGCAGGACATCGTGCGTTCGGTCACCCGGGTGACCGACATTATGGGAG
AGATCGCCTCGGCGTCTGATGAGCAGAGCCGCGGCATCGAACAGGTGACACAGGCGGTCACCCAGATGGATCAGGTAACA
CAACAAAATGCCGCGTTGGTGGAGGAGGCAGCCTCGGCGGCCGTCGCGCTGGAAGAACAGGCGATTACCCTGGCCGACGC
GGTGTCGGTATTCCGCCTGGCGGACGATAACTTCACCGCCCCGGCCAACTCTCAAAACGCAGTTTCACTCGTGGTAAAGG
AAGCCCCAGATTGTCAAACCGCATAA

Upstream 100 bases:

>100_bases
GATTCCCCGTTGGCCGATTGGCACAAGGCAGGAGAAACCCCGTTTCCCCACTTGGCCAGAAATCTGAGCTGGCCACCGGC
CGGCTGCAAGGAGGTTCACA

Downstream 100 bases:

>100_bases
GCAGCCCGTTTTTATTGAGTGAGATGGTATGAAGCCGGCACCCTCGACCCCTAACCGAGACCCTGCGACCTTATTGACGC
AGATGGTACAGCGTCTGCCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MFNRIRVSTSLFLLLMTFCVMQLATSGLSYTAFRSDNHNLNLITLGSQQRDALSLSWVSLLQARNTLNRAGTRAALKLPQ
DQVNALMGNARSSLQKADLYFNQFLAVPRNSEQEQQLTATTKASYDRLRNTLRELIGFLENDNLQAFMDQPTQKTQDLFE
ADFVQYLQLVSANVSEANAANQRSFTLSGWLVAGAVLMLIVVTGSAMWWLRNMLVRPLNIMRSHFDRIAAGDLATPIQVY
GRNEISQLFASLQRMQQSLIGTVGAVRDGAESILIGLQEISEGNNDLSSRTEQQAASLEETAASMEQLTATVKQNADNAR
QASQLARDASTTAAKGGELAGDVVTTMHDIANSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLAQRSAQAAKEIKGLIDESVSRVKQGSVLVENSGATMQDIVRSVTRVTDIMGEIASASDEQSRGIEQVTQAVTQMDQVT
QQNAALVEEAASAAVALEEQAITLADAVSVFRLADDNFTAPANSQNAVSLVVKEAPDCQTA

Sequences:

>Translated_541_residues
MFNRIRVSTSLFLLLMTFCVMQLATSGLSYTAFRSDNHNLNLITLGSQQRDALSLSWVSLLQARNTLNRAGTRAALKLPQ
DQVNALMGNARSSLQKADLYFNQFLAVPRNSEQEQQLTATTKASYDRLRNTLRELIGFLENDNLQAFMDQPTQKTQDLFE
ADFVQYLQLVSANVSEANAANQRSFTLSGWLVAGAVLMLIVVTGSAMWWLRNMLVRPLNIMRSHFDRIAAGDLATPIQVY
GRNEISQLFASLQRMQQSLIGTVGAVRDGAESILIGLQEISEGNNDLSSRTEQQAASLEETAASMEQLTATVKQNADNAR
QASQLARDASTTAAKGGELAGDVVTTMHDIANSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLAQRSAQAAKEIKGLIDESVSRVKQGSVLVENSGATMQDIVRSVTRVTDIMGEIASASDEQSRGIEQVTQAVTQMDQVT
QQNAALVEEAASAAVALEEQAITLADAVSVFRLADDNFTAPANSQNAVSLVVKEAPDCQTA
>Mature_541_residues
MFNRIRVSTSLFLLLMTFCVMQLATSGLSYTAFRSDNHNLNLITLGSQQRDALSLSWVSLLQARNTLNRAGTRAALKLPQ
DQVNALMGNARSSLQKADLYFNQFLAVPRNSEQEQQLTATTKASYDRLRNTLRELIGFLENDNLQAFMDQPTQKTQDLFE
ADFVQYLQLVSANVSEANAANQRSFTLSGWLVAGAVLMLIVVTGSAMWWLRNMLVRPLNIMRSHFDRIAAGDLATPIQVY
GRNEISQLFASLQRMQQSLIGTVGAVRDGAESILIGLQEISEGNNDLSSRTEQQAASLEETAASMEQLTATVKQNADNAR
QASQLARDASTTAAKGGELAGDVVTTMHDIANSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLAQRSAQAAKEIKGLIDESVSRVKQGSVLVENSGATMQDIVRSVTRVTDIMGEIASASDEQSRGIEQVTQAVTQMDQVT
QQNAALVEEAASAAVALEEQAITLADAVSVFRLADDNFTAPANSQNAVSLVVKEAPDCQTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=516, Percent_Identity=57.1705426356589, Blast_Score=555, Evalue=1e-159,
Organism=Escherichia coli, GI2367378, Length=523, Percent_Identity=55.4493307839388, Blast_Score=489, Evalue=1e-139,
Organism=Escherichia coli, GI1788195, Length=545, Percent_Identity=50.0917431192661, Blast_Score=438, Evalue=1e-124,
Organism=Escherichia coli, GI1787690, Length=404, Percent_Identity=53.4653465346535, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1789453, Length=336, Percent_Identity=41.0714285714286, Blast_Score=224, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58325; Mature: 58325

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRIRVSTSLFLLLMTFCVMQLATSGLSYTAFRSDNHNLNLITLGSQQRDALSLSWVSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH
LQARNTLNRAGTRAALKLPQDQVNALMGNARSSLQKADLYFNQFLAVPRNSEQEQQLTAT
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TKASYDRLRNTLRELIGFLENDNLQAFMDQPTQKTQDLFEADFVQYLQLVSANVSEANAA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCC
NQRSFTLSGWLVAGAVLMLIVVTGSAMWWLRNMLVRPLNIMRSHFDRIAAGDLATPIQVY
CCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
GRNEISQLFASLQRMQQSLIGTVGAVRDGAESILIGLQEISEGNNDLSSRTEQQAASLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TAASMEQLTATVKQNADNARQASQLARDASTTAAKGGELAGDVVTTMHDIANSSQKIGAI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
TSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VSRVKQGSVLVENSGATMQDIVRSVTRVTDIMGEIASASDEQSRGIEQVTQAVTQMDQVT
HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH
QQNAALVEEAASAAVALEEQAITLADAVSVFRLADDNFTAPANSQNAVSLVVKEAPDCQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
A
C
>Mature Secondary Structure
MFNRIRVSTSLFLLLMTFCVMQLATSGLSYTAFRSDNHNLNLITLGSQQRDALSLSWVSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH
LQARNTLNRAGTRAALKLPQDQVNALMGNARSSLQKADLYFNQFLAVPRNSEQEQQLTAT
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TKASYDRLRNTLRELIGFLENDNLQAFMDQPTQKTQDLFEADFVQYLQLVSANVSEANAA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCC
NQRSFTLSGWLVAGAVLMLIVVTGSAMWWLRNMLVRPLNIMRSHFDRIAAGDLATPIQVY
CCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
GRNEISQLFASLQRMQQSLIGTVGAVRDGAESILIGLQEISEGNNDLSSRTEQQAASLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TAASMEQLTATVKQNADNARQASQLARDASTTAAKGGELAGDVVTTMHDIANSSQKIGAI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
TSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VSRVKQGSVLVENSGATMQDIVRSVTRVTDIMGEIASASDEQSRGIEQVTQAVTQMDQVT
HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH
QQNAALVEEAASAAVALEEQAITLADAVSVFRLADDNFTAPANSQNAVSLVVKEAPDCQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]