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The map label for this gene is flgF [H]

Identifier: 157371206

GI number: 157371206

Start: 3265600

End: 3266355

Strand: Reverse

Name: flgF [H]

Synonym: Spro_2966

Alternate gene names: 157371206

Gene position: 3266355-3265600 (Counterclockwise)

Preceding gene: 157371207

Following gene: 157371205

Centisome position: 59.95

GC content: 61.77

Gene sequence:

>756_bases
ATGGATCACGCGATTTATACCGCGATGGGCGCGGCGCGGCAGACGCTGGAGCAGCAATCGGTTACTGCCAACAACCTGGC
TAATGCCTCGACGCCGGGTTTCCGTGCTCAGCTTTCGGCGCTGCGTGCGGTGCCGGTAGACGGGCCAAGCCTGCTGACGC
GCACGCTGGTTACCGCGTCAACGCCGGGTGCCGACATGAGCCAGGGGGCGCTGAACTATACCGCGCGCCCGCTGGACGTG
GCGTTGCAACAGGACGGTTTTCTGGCGGTCAGCCTGCCGGATGGCGGCGAAGCCTACACCCGCAACGGTAATCTTCAGAT
CTCCTCCACCGGGCAGTTGACGGTGCAGGGCAGGCCGGTAATGGGCGATGGCGGGCCGATTGAGGTGCCGCCGTCGGCAG
AGATCACCATTGCCGCCGACGGTACCATCTCGGCACTGAATGCGGGCGATCCGCCGAATACCCTCGCACAGATTGGTCGG
CTGAAACTGGTCAAGGCCGACGCACGCGAAGTGACGCGCGGCGATGACGGTCTGTTCCGTCTGACGCCGGAAACCCAGCA
GCAGCGCGGTAATCAGTTACCGAACGATCCTTTGGTGCGGGTCATGCCGGGCGTGCTGGAAGGCAGCAACGTCAAACCAA
TGGAAACCATGGTTGACATGATCGCCAACGCCCGCCGGTTTGAAATGCAGATGAAAGTCATCCACAGCGTGGATGAAAAT
GAACAGCGCGCCAACTCGTTGTTATCACTGAGTTAA

Upstream 100 bases:

>100_bases
GATCGTCGCCCAGCGTAACTACCAGTCGAATGCCCAGACCATTAAAACGCAGGATTCGATCCTGCAGACGCTGGTCAGCC
TGCGCTAATAGGATTGATTT

Downstream 100 bases:

>100_bases
GCAGCAAGGAAATAACCCATGATCCCATCTTTATGGATTGCCAAAACCGGTCTGGATGCGCAGCAGACCAACATGGACGT
GATTGCCAACAACCTGGCCA

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAVPVDGPSLLTRTLVTASTPGADMSQGALNYTARPLDV
ALQQDGFLAVSLPDGGEAYTRNGNLQISSTGQLTVQGRPVMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGR
LKLVKADAREVTRGDDGLFRLTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDEN
EQRANSLLSLS

Sequences:

>Translated_251_residues
MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAVPVDGPSLLTRTLVTASTPGADMSQGALNYTARPLDV
ALQQDGFLAVSLPDGGEAYTRNGNLQISSTGQLTVQGRPVMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGR
LKLVKADAREVTRGDDGLFRLTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDEN
EQRANSLLSLS
>Mature_251_residues
MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAVPVDGPSLLTRTLVTASTPGADMSQGALNYTARPLDV
ALQQDGFLAVSLPDGGEAYTRNGNLQISSTGQLTVQGRPVMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGR
LKLVKADAREVTRGDDGLFRLTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDEN
EQRANSLLSLS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=251, Percent_Identity=73.3067729083665, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=32.5842696629214, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26572; Mature: 26572

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAVPVDGPSLLTRTLVTAS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
TPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNLQISSTGQLTVQGRPV
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEECCCEEEECCCEEEECCCEE
MGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGRLKLVKADAREVTRGDDGLFR
ECCCCCEECCCCCCEEEEECCCEEECCCCCCHHHHHHHCCEEEEECCHHHHHCCCCCEEE
LTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDEN
ECCHHHHHHCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCH
EQRANSLLSLS
HHHHHHHCCCC
>Mature Secondary Structure
MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAVPVDGPSLLTRTLVTAS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
TPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNLQISSTGQLTVQGRPV
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEECCCEEEECCCEEEECCCEE
MGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGRLKLVKADAREVTRGDDGLFR
ECCCCCEECCCCCCEEEEECCCEEECCCCCCHHHHHHHCCEEEEECCHHHHHCCCCCEEE
LTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDEN
ECCHHHHHHCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCH
EQRANSLLSLS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]