Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is putP [H]
Identifier: 157371170
GI number: 157371170
Start: 3228300
End: 3229784
Strand: Reverse
Name: putP [H]
Synonym: Spro_2930
Alternate gene names: 157371170
Gene position: 3229784-3228300 (Counterclockwise)
Preceding gene: 157371174
Following gene: 157371169
Centisome position: 59.27
GC content: 56.43
Gene sequence:
>1485_bases ATGACAATGAGCACACCGATGCTGGTGACCTTCCTGGTGTATATCTTCGGGATGGTGTTAATCGGCTTACTTGCCTATCG GGCAACCAATAACTTTGACGACTACATTCTGGGCGGTCGTAGCCTGGGTAGCGTAGTGACCGCGCTTTCTGCCGGCGCAT CAGACATGAGCGGCTGGCTGTTGATGGGCCTGCCGGGCGCCATCTTCCTGTCCGGCATCTCCGAAAGCTGGATTGCCATT GGCCTGACGATCGGTGCTTATTTCAACTGGAAGCTGGTGGCAGGGCGGCTGCGCGTGCATACCGAAGCCAACAATAATGC CCTGACGCTGCCGGATTACTTCACCAGCCGTTTTGAAGACAACAGTAAGTTGCTGCGGGTGATTTCCGCCATTGTTATCC TGGTGTTCTTCACTATCTACTGTGCTTCCGGCATTGTGGCCGGTGCGCGCCTGTTCGAGAGCACCTTCGGGATGAGCTAC GAAACCGCGCTGTGGGCCGGTGCTGCTGCCACTATCCTTTATACCTTTATCGGCGGATTCCTGGCGGTGAGCTGGACCGA TACCGTGCAGGCCAGCCTGATGATTTTCGCGCTGATCCTGACGCCGGTGATTGTTATCTTCGCGGTTGGCGGCATTGATA CCTCGATGATGGTGATTGAGGCCAAGAATCCGGCCAATCTCGATATGCTGAAAGGTTTGAACTTTGTGGCGATCCTCTCG CTGCTGGGTTGGGGCCTGGGTTACTTCGGTCAGCCACACATTCTGGCGCGCTTTATGGCGGCAGACTCTCACCGCACCAT TCGCAGCGCACGCCGCATCAGCATGACCTGGATGATCCTGTGTCTGGCCGGTACCATTGCGGTCGGTTTCTTCGGGATTG CCTACTTCGCCAATAACCCGGATCAGGCGGGCAATGTATCGCAGAACGGTGAGCGCGTGTTTATCGAATTGGCGATGCTT CTGTTCAACCCGTGGGTAGCGGGCATTCTGCTGTCGGCGATTTTGGCGGCGGTAATGAGTACTCTGAGCTGCCAACTGTT GGTGTGTTCAAGTGCAATTACCGAAGACCTGTACAAGGCCTTCCTGCGTAAGGGTGCCAGCCAGCGTGAGCTGGTGTGGG TCGGGCGCTTCATGGTGTTGCTGGTGGCGTTGATTGCCATCGCGCTGGCGGCAAACCCGGAAAACCGCGTACTGGGTCTG GTGAGCTACGCCTGGGCCGGCTTCGGTGCAGCCTTTGGTCCAGTGGTGTTGATCTCGGTAATGTGGTCACGCATGACGCG TAATGGCGCTTTGGCCGGTATGTTGGTGGGCGCGGCAACGGTGATCGTCTGGAAACAGTTTGCCTGGTTGGATTTGTATG AAATTATCCCGGGCTTCCTGTTCGCTTGTATCGCCATCGTGGTGGTGAGCCTGATGGGGCGTCAGCCTTCGGCAACCATC ACCGAACGTTTTGATCAGGCAGAAGCCGAGTTCAAAACCGTTTAA
Upstream 100 bases:
>100_bases TTCACCTGCGGGGGGCCCGCAATTTCGCCACGTTCCGGCGGATTGGCAAGCAGTAACTATCGCAATACAGCGCGAAATAA TAATGAGAGTGGAGAATTTC
Downstream 100 bases:
>100_bases TCCTCTCGAGTTAATCATCTCAAAGGGCGCTTAATGCGCCCTTAGGTTGCTGACAAAGCAGGAAAAAACGTGGTTTTTCC TGCTTTGTGGTGATCAGCCG
Product: sodium/proline symporter
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTMSTPMLVTFLVYIFGMVLIGLLAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAI GLTIGAYFNWKLVAGRLRVHTEANNNALTLPDYFTSRFEDNSKLLRVISAIVILVFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIFAVGGIDTSMMVIEAKNPANLDMLKGLNFVAILS LLGWGLGYFGQPHILARFMAADSHRTIRSARRISMTWMILCLAGTIAVGFFGIAYFANNPDQAGNVSQNGERVFIELAML LFNPWVAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKGASQRELVWVGRFMVLLVALIAIALAANPENRVLGL VSYAWAGFGAAFGPVVLISVMWSRMTRNGALAGMLVGAATVIVWKQFAWLDLYEIIPGFLFACIAIVVVSLMGRQPSATI TERFDQAEAEFKTV
Sequences:
>Translated_494_residues MTMSTPMLVTFLVYIFGMVLIGLLAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAI GLTIGAYFNWKLVAGRLRVHTEANNNALTLPDYFTSRFEDNSKLLRVISAIVILVFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIFAVGGIDTSMMVIEAKNPANLDMLKGLNFVAILS LLGWGLGYFGQPHILARFMAADSHRTIRSARRISMTWMILCLAGTIAVGFFGIAYFANNPDQAGNVSQNGERVFIELAML LFNPWVAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKGASQRELVWVGRFMVLLVALIAIALAANPENRVLGL VSYAWAGFGAAFGPVVLISVMWSRMTRNGALAGMLVGAATVIVWKQFAWLDLYEIIPGFLFACIAIVVVSLMGRQPSATI TERFDQAEAEFKTV >Mature_493_residues TMSTPMLVTFLVYIFGMVLIGLLAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAIG LTIGAYFNWKLVAGRLRVHTEANNNALTLPDYFTSRFEDNSKLLRVISAIVILVFFTIYCASGIVAGARLFESTFGMSYE TALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIFAVGGIDTSMMVIEAKNPANLDMLKGLNFVAILSL LGWGLGYFGQPHILARFMAADSHRTIRSARRISMTWMILCLAGTIAVGFFGIAYFANNPDQAGNVSQNGERVFIELAMLL FNPWVAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKGASQRELVWVGRFMVLLVALIAIALAANPENRVLGLV SYAWAGFGAAFGPVVLISVMWSRMTRNGALAGMLVGAATVIVWKQFAWLDLYEIIPGFLFACIAIVVVSLMGRQPSATIT ERFDQAEAEFKTV
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=492, Percent_Identity=45.9349593495935, Blast_Score=433, Evalue=1e-121, Organism=Homo sapiens, GI167466278, Length=428, Percent_Identity=24.2990654205607, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI110835708, Length=503, Percent_Identity=23.4592445328032, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1787251, Length=493, Percent_Identity=82.7586206896552, Blast_Score=805, Evalue=0.0, Organism=Escherichia coli, GI1790503, Length=446, Percent_Identity=26.9058295964126, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI87082237, Length=485, Percent_Identity=26.8041237113402, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI115533094, Length=430, Percent_Identity=24.8837209302326, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI221459584, Length=382, Percent_Identity=21.9895287958115, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24645928, Length=356, Percent_Identity=24.1573033707865, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651741, Length=465, Percent_Identity=22.3655913978495, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI221459588, Length=374, Percent_Identity=23.7967914438503, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53407; Mature: 53276
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSTPMLVTFLVYIFGMVLIGLLAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCEE LMGLPGAIFLSGISESWIAIGLTIGAYFNWKLVAGRLRVHTEANNNALTLPDYFTSRFED EECCCHHHHHHCCCCCHHEEEEEHHCEEEEEEEECEEEEEEECCCCEEECCHHHHHHCCC NSKLLRVISAIVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQASLMIFALILTPVIVIFAVGGIDTSMMVIEAKNPANLDMLKGLNFVAILS HEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCHHHHHHH LLGWGLGYFGQPHILARFMAADSHRTIRSARRISMTWMILCLAGTIAVGFFGIAYFANNP HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQAGNVSQNGERVFIELAMLLFNPWVAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKGASQRELVWVGRFMVLLVALIAIALAANPENRVLGLVSYAWAGFGAAFGPVVLISV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCHHHHHHHHHHH MWSRMTRNGALAGMLVGAATVIVWKQFAWLDLYEIIPGFLFACIAIVVVSLMGRQPSATI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TERFDQAEAEFKTV HHHHHHHHHHHCCC >Mature Secondary Structure TMSTPMLVTFLVYIFGMVLIGLLAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCEE LMGLPGAIFLSGISESWIAIGLTIGAYFNWKLVAGRLRVHTEANNNALTLPDYFTSRFED EECCCHHHHHHCCCCCHHEEEEEHHCEEEEEEEECEEEEEEECCCCEEECCHHHHHHCCC NSKLLRVISAIVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQASLMIFALILTPVIVIFAVGGIDTSMMVIEAKNPANLDMLKGLNFVAILS HEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCHHHHHHH LLGWGLGYFGQPHILARFMAADSHRTIRSARRISMTWMILCLAGTIAVGFFGIAYFANNP HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQAGNVSQNGERVFIELAMLLFNPWVAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKGASQRELVWVGRFMVLLVALIAIALAANPENRVLGLVSYAWAGFGAAFGPVVLISV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHCHHHHHHHHHHH MWSRMTRNGALAGMLVGAATVIVWKQFAWLDLYEIIPGFLFACIAIVVVSLMGRQPSATI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TERFDQAEAEFKTV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]