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The map label for this gene is yecD [H]

Identifier: 157371023

GI number: 157371023

Start: 3062745

End: 3063323

Strand: Direct

Name: yecD [H]

Synonym: Spro_2783

Alternate gene names: 157371023

Gene position: 3062745-3063323 (Clockwise)

Preceding gene: 157371015

Following gene: 157371024

Centisome position: 56.21

GC content: 59.07

Gene sequence:

>579_bases
ATGTTAAAACTTGATGCTCAAACCACGGCCCTGGTCTTGATTGATTTGCAAAACGGCATTCTGCCCTATGCCGGTGGACC
ACACAGCGCCGAGAGCGTGGTTGCCCATGGTGCACAGTTGGCAGCACACTTTCGTTCGCTGGGTGCACCGGTTGTCCTGG
TGCGCGTCGGCTGGTCAGATTCCTTTGCCGAAGCGCTGAAACAGCCGGTGGATCAACCCGCCCCAGCGCCTGCAGGCGGG
TTGCCGGCCAACTGGTGGGAATTCCCCAAGTCTCTGGCGGTTAGCGACAGCGATATCCTGGTGACCAAACGCCAATGGGG
TGCATTTTACGGCACCGACCTTGAGCTGCAACTGCGTCGCCGCGGCATCAAATCCATCGTGCTGGGGGGCATTGCCACCA
ACATCGGCGTGGAATCGACCGCCCGTGACGCCTGGGAACACGGCTATGAATTGGTGATCGCCGAAGACCTGTGCAGCGCA
CCCAACGCTGAAATGCACCAGTTTGCTTTCAACAACATCTTCCCACGTCTGGCGCGCGTTCGCAGCACCCGTGAAATTCT
TGCCGCCATCGGCGAGTAA

Upstream 100 bases:

>100_bases
ATTAACCCGTGACGCTTTTTTCACGTAGCCTGAATCAACCCCTGTTTAGCACGCCGGCTCACCTGCGCGTATTTTATCCA
CCTCGTAACGAGATATTCTC

Downstream 100 bases:

>100_bases
CGTTAAGTTGTAGGGGCGCCGCATACTGCGCCCGCGTTCGACTGACAGGGATAATTAAGGAAGATGCCAGCTTGATGTAT
ATCGGACTCCCACAGTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLKLDAQTTALVLIDLQNGILPYAGGPHSAESVVAHGAQLAAHFRSLGAPVVLVRVGWSDSFAEALKQPVDQPAPAPAGG
LPANWWEFPKSLAVSDSDILVTKRQWGAFYGTDLELQLRRRGIKSIVLGGIATNIGVESTARDAWEHGYELVIAEDLCSA
PNAEMHQFAFNNIFPRLARVRSTREILAAIGE

Sequences:

>Translated_192_residues
MLKLDAQTTALVLIDLQNGILPYAGGPHSAESVVAHGAQLAAHFRSLGAPVVLVRVGWSDSFAEALKQPVDQPAPAPAGG
LPANWWEFPKSLAVSDSDILVTKRQWGAFYGTDLELQLRRRGIKSIVLGGIATNIGVESTARDAWEHGYELVIAEDLCSA
PNAEMHQFAFNNIFPRLARVRSTREILAAIGE
>Mature_192_residues
MLKLDAQTTALVLIDLQNGILPYAGGPHSAESVVAHGAQLAAHFRSLGAPVVLVRVGWSDSFAEALKQPVDQPAPAPAGG
LPANWWEFPKSLAVSDSDILVTKRQWGAFYGTDLELQLRRRGIKSIVLGGIATNIGVESTARDAWEHGYELVIAEDLCSA
PNAEMHQFAFNNIFPRLARVRSTREILAAIGE

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=190, Percent_Identity=67.8947368421053, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI87081820, Length=176, Percent_Identity=30.6818181818182, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20707; Mature: 20707

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLDAQTTALVLIDLQNGILPYAGGPHSAESVVAHGAQLAAHFRSLGAPVVLVRVGWSD
CEEECCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
SFAEALKQPVDQPAPAPAGGLPANWWEFPKSLAVSDSDILVTKRQWGAFYGTDLELQLRR
HHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCEEEEEHHCCCCCCCCHHHHHHH
RGIKSIVLGGIATNIGVESTARDAWEHGYELVIAEDLCSAPNAEMHQFAFNNIFPRLARV
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
RSTREILAAIGE
HHHHHHHHHHCC
>Mature Secondary Structure
MLKLDAQTTALVLIDLQNGILPYAGGPHSAESVVAHGAQLAAHFRSLGAPVVLVRVGWSD
CEEECCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
SFAEALKQPVDQPAPAPAGGLPANWWEFPKSLAVSDSDILVTKRQWGAFYGTDLELQLRR
HHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCEEEEEHHCCCCCCCCHHHHHHH
RGIKSIVLGGIATNIGVESTARDAWEHGYELVIAEDLCSAPNAEMHQFAFNNIFPRLARV
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
RSTREILAAIGE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]