| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yeaH [C]
Identifier: 157370972
GI number: 157370972
Start: 3009910
End: 3011178
Strand: Direct
Name: yeaH [C]
Synonym: Spro_2732
Alternate gene names: 157370972
Gene position: 3009910-3011178 (Clockwise)
Preceding gene: 157370971
Following gene: 157370975
Centisome position: 55.24
GC content: 54.29
Gene sequence:
>1269_bases ATGGCTTATTTTATTGACCGACGGCTGAACGGTAAAAACAAGAGCATGGTGAACCGCCAGCGCTTCTTGCGTCGTTACAA GTCGCAAATCAAACAGTCGATTGCCGAAGCCATCAACAAGCGTTCGGTCACCGACGTAGACAGCGGGGAGTCCGTCTCGA TCCCCACTGGCGATATCAACGAGCCGATGTTTCATCAGGGTCGCGGTGGCACACGCCACCGCGTTCATCCCGGTAATGAC CACTTTGTCCAGAATGACCGCGTTGAGCGCCCACAGGGTGGCGGCGGCGGTGGCAGCGGCCAGGGTAACGCCAGCCAGGA CGGCGAAGGCGAGGACGAATTCGTCTTCCAGATCTCCAAGGACGAATATCTCGATCTGCTGTTTGAGGATCTGGCGCTGC CAAACCTGAAAAAGAATCAGTACAAGCAGCTCACCGAGTACAAAACCCATAGGGCCGGTTACACCGCCAACGGCGTGCCG GCTAACATCAGCGTAGTACGTTCGCTGCAAAACTCATTGGCGCGACGAACCGCCATGACCGCCGGTAAACGGCGCGCCTT ACATGAGTTGGAAGACGAACTCACCCAGATGGAAAACACCGAACCGGTGCAACTACTGGAAGAGGAACGGCTGCGGAAGG AAATTGCCGAGTTGCGCAAAAAAATCGAAAGCGTGCCCTTTATCGACACCTTCGATTTACGTTACAAGAACTATGAACGG CGGCCCGAGCCCTCCAGCCAGGCGGTGATGTTCTGCCTGATGGACGTTTCCGGCTCGATGGACCAGGCCACCAAAGACAT GGCCAAACGTTTCTATATTCTGCTCTATCTGTTCCTGAGCAGAACCTATAAAAACGTCGACGTGGTGTACATCCGTCACC ATACCCAGGCGAAGGAAGTGGACGAACAGGAGTTCTTCTACTCGCAGGAGACTGGCGGCACCATAGTTTCCAGCGCGCTG AAACTGATGAATGAAGTGGTTGAAGAACGTTACGACCCGGCGCAATGGAACATCTACGCCGCACAGGCATCGGATGGCGA TAACTGGGCCGATGACTCACCGCTATGTCATGAACTGCTGGCGAAGAAACTGCTGCCGATGGTGCGTTATTACAGCTACA TTGAAATCACCCGCCGTGCCCATCAAACACTGTGGCGTGAGTATGAAGACCTGCAGGCGAAATGCGAAAACTTTGCCATG CAGCATATCCGCGAACCGGACGATATCTATCCGGTGTTCCGCGAACTTTTTCATAAGCAGACCGCATAA
Upstream 100 bases:
>100_bases TGTGAATGGTATCTGCGGGTCAGAAAGTCTTCATAACGTCTAATGAGAATTAGCGTCATGGAGATGGCGTAGAAAGTTGG CAACGTCGTTTGGGGGAAGT
Downstream 100 bases:
>100_bases TTAACATCTTTACCAACGGCCGGTTAATCAGACTAATCGGCCGTTTTCTTTTGCAAAAATAATGAAAACTGCCACTGGAA AGTTTTAATTCAGGTTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIAEAINKRSVTDVDSGESVSIPTGDINEPMFHQGRGGTRHRVHPGND HFVQNDRVERPQGGGGGGSGQGNASQDGEGEDEFVFQISKDEYLDLLFEDLALPNLKKNQYKQLTEYKTHRAGYTANGVP ANISVVRSLQNSLARRTAMTAGKRRALHELEDELTQMENTEPVQLLEEERLRKEIAELRKKIESVPFIDTFDLRYKNYER RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSAL KLMNEVVEERYDPAQWNIYAAQASDGDNWADDSPLCHELLAKKLLPMVRYYSYIEITRRAHQTLWREYEDLQAKCENFAM QHIREPDDIYPVFRELFHKQTA
Sequences:
>Translated_422_residues MAYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIAEAINKRSVTDVDSGESVSIPTGDINEPMFHQGRGGTRHRVHPGND HFVQNDRVERPQGGGGGGSGQGNASQDGEGEDEFVFQISKDEYLDLLFEDLALPNLKKNQYKQLTEYKTHRAGYTANGVP ANISVVRSLQNSLARRTAMTAGKRRALHELEDELTQMENTEPVQLLEEERLRKEIAELRKKIESVPFIDTFDLRYKNYER RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSAL KLMNEVVEERYDPAQWNIYAAQASDGDNWADDSPLCHELLAKKLLPMVRYYSYIEITRRAHQTLWREYEDLQAKCENFAM QHIREPDDIYPVFRELFHKQTA >Mature_421_residues AYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIAEAINKRSVTDVDSGESVSIPTGDINEPMFHQGRGGTRHRVHPGNDH FVQNDRVERPQGGGGGGSGQGNASQDGEGEDEFVFQISKDEYLDLLFEDLALPNLKKNQYKQLTEYKTHRAGYTANGVPA NISVVRSLQNSLARRTAMTAGKRRALHELEDELTQMENTEPVQLLEEERLRKEIAELRKKIESVPFIDTFDLRYKNYERR PEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSALK LMNEVVEERYDPAQWNIYAAQASDGDNWADDSPLCHELLAKKLLPMVRYYSYIEITRRAHQTLWREYEDLQAKCENFAMQ HIREPDDIYPVFRELFHKQTA
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=423, Percent_Identity=87.7068557919622, Blast_Score=764, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48920; Mature: 48788
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIAEAINKRSVTDVDSGESVSIPTGDIN CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC EPMFHQGRGGTRHRVHPGNDHFVQNDRVERPQGGGGGGSGQGNASQDGEGEDEFVFQISK CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH DEYLDLLFEDLALPNLKKNQYKQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AGKRRALHELEDELTQMENTEPVQLLEEERLRKEIAELRKKIESVPFIDTFDLRYKNYER HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHC DEQEFFYSQETGGTIVSSALKLMNEVVEERYDPAQWNIYAAQASDGDNWADDSPLCHELL CHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AKKLLPMVRYYSYIEITRRAHQTLWREYEDLQAKCENFAMQHIREPDDIYPVFRELFHKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC TA CC >Mature Secondary Structure AYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIAEAINKRSVTDVDSGESVSIPTGDIN CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC EPMFHQGRGGTRHRVHPGNDHFVQNDRVERPQGGGGGGSGQGNASQDGEGEDEFVFQISK CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH DEYLDLLFEDLALPNLKKNQYKQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AGKRRALHELEDELTQMENTEPVQLLEEERLRKEIAELRKKIESVPFIDTFDLRYKNYER HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHC DEQEFFYSQETGGTIVSSALKLMNEVVEERYDPAQWNIYAAQASDGDNWADDSPLCHELL CHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AKKLLPMVRYYSYIEITRRAHQTLWREYEDLQAKCENFAMQHIREPDDIYPVFRELFHKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA