Click here to switch to the map view.

The map label for this gene is ybiJ [H]

Identifier: 157370888

GI number: 157370888

Start: 2916753

End: 2917013

Strand: Direct

Name: ybiJ [H]

Synonym: Spro_2648

Alternate gene names: 157370888

Gene position: 2916753-2917013 (Clockwise)

Preceding gene: 157370885

Following gene: 157370889

Centisome position: 53.53

GC content: 58.24

Gene sequence:

>261_bases
ATGAAAAGCATCAAATATTTTGCAGCAGCCGCCGCTATCGCCATGACCTCTTTCGCTACCTTCGCAGCTGAGCCGGTAGA
CCTACAGCAGGCCACCAGCCTGAGCGCATCCGGCGTCGTCTCTGCAGGCCATGCCACGACGCTGAGCAGCCTGGAGGCCA
AACTGGCCGCCAAAGCCGAAGCCCAGGGCGCCAGCAGCTACCGCATTATCTCTGCCGGTGGTAATAACATGCTAAGTGGC
ACCGCCGTCATCTACAAATAA

Upstream 100 bases:

>100_bases
TGCTCAGCATTATCAGATTTTAAATCTTTCTGGATGCTTTATTATTCAACACATCGGAAACGAACGGCTTCCAACCCAAA
CAAACAGACTGGAGTTTCTT

Downstream 100 bases:

>100_bases
GCACTCTGGTATAGAGCCCGGCACGCCGGGCTCTACCTCAATACTCCCGCCTTATCGTTCATTATCCCCCCGCTCAATGT
TACAGAAATATTAAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKSIKYFAAAAAIAMTSFATFAAEPVDLQQATSLSASGVVSAGHATTLSSLEAKLAAKAEAQGASSYRIISAGGNNMLSG
TAVIYK

Sequences:

>Translated_86_residues
MKSIKYFAAAAAIAMTSFATFAAEPVDLQQATSLSASGVVSAGHATTLSSLEAKLAAKAEAQGASSYRIISAGGNNMLSG
TAVIYK
>Mature_86_residues
MKSIKYFAAAAAIAMTSFATFAAEPVDLQQATSLSASGVVSAGHATTLSSLEAKLAAKAEAQGASSYRIISAGGNNMLSG
TAVIYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787021, Length=86, Percent_Identity=59.3023255813954, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI1787355, Length=87, Percent_Identity=48.2758620689655, Blast_Score=67, Evalue=2e-13,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=44.1860465116279, Blast_Score=64, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8617; Mature: 8617

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKYFAAAAAIAMTSFATFAAEPVDLQQATSLSASGVVSAGHATTLSSLEAKLAAKAE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHC
AQGASSYRIISAGGNNMLSGTAVIYK
CCCCCCEEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MKSIKYFAAAAAIAMTSFATFAAEPVDLQQATSLSASGVVSAGHATTLSSLEAKLAAKAE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHC
AQGASSYRIISAGGNNMLSGTAVIYK
CCCCCCEEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]