Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is ypwA [H]
Identifier: 157370832
GI number: 157370832
Start: 2850037
End: 2851533
Strand: Direct
Name: ypwA [H]
Synonym: Spro_2592
Alternate gene names: 157370832
Gene position: 2850037-2851533 (Clockwise)
Preceding gene: 157370831
Following gene: 157370833
Centisome position: 52.31
GC content: 55.78
Gene sequence:
>1497_bases ATGACATCTGCACATTCCCCTTCTTCTTACGACGAGCTGCGTGCCATTTTCACCCGCCTGTCACGCTTCGGCCATCTCTC CGCCATTGCCGGCTGGGATATGCAAACCATGATGCCACCGGGCGGCAGCAAAGCGCGTTCCGAGGCACTGGCTGAGCTAA GCGTATTGCAACACCAGATTTTAACATCGGATAAAACCGGTCGTCTGTTTGAACGCGCACAGCAAGAAACGCTGGACGAC ATTGACCAGGCGAATTTGCTGGAGATGCGCCGCCAGTATGACAATGCAGTGCTGGTACCAGAATCGTTGGTCGAGGCTAA ATCCCTGGCCGGTGCACGCTGTGAACATGCCTGGCGTTCCCAACGCCCAGCCAACGACTGGGAAGGTTTCGCGGAGAATC TGCGCGAAGTGGTTAAACTGAGCCGCCAGGAAGCCCAGATCCGTGCCGAAGCGGCAGGTAGCAGTCGTTATGATGCCCTG CTGAACCTTTATGAACCGGGAATGCGCAGCAGCGATATAGACCGTATCTTTGGTGACCTGAAAACCTGGCTGCCCGACCT GCTGCAGAAGGTGGTGGCCAAACAGGCCCAGGAACCTTGTCTGGTTCCGCAGGGGCCGTTCAATGTGGAAACCCAACGTC AACTGAGCCTGAGCGTGATGAAGCTGCTCGGCTTTAACTTCGACGGCGGTCGCGTGGACGTCAGCGCTCACCCATTCTGC GGCGGCGTACCGGAAGATGTTCGTATTACCACCCGCTACAACGACAAAGAATTTCTGACCGCATTGCTCGGCATCGTGCA TGAGACCGGCCATGCTCGTTACGAACAAAATCTGCCACGCGAATGGCTGGGCCAGCCGGTAGCCCAGGCTCGTTCAACCG CTATCCATGAGTCGCAGAGTCTGCTGTTTGAAATGCAACTGGCGCGCGGCAGCGATTTCCTGAAGATCCTGCGTCCACTG GTGGTCAAACAATTCGGCGAGCAACCTGCATTGGAAGAAGGTAACTTCATTCGACTAAATCAGCGAGTGAAACCAGGCCT GATCCGCGTAGACGCTGACGAAGTCAGTTACCCGGCGCACGTGATCCTGCGCTATGAAATCGAAAAGGCTCTGGTCGAAG GCGAGATTGAGGTAGAAGATATCCCGGCGCTGTGGGGCGAGAAAATGCACGGTTACCTTGGCCTCGATACTATCGGCAAC TACCGTAACGGCTGTATGCAGGATATTCACTGGACCGATGGTGCCTTCGGTTACTTCCCGACTTACACCCTGGGTGCCAT GTATGCCGCGCAACTGTTCCACAGCGTCCGCAAAGCGCTGCCAACGCTGGACAGTGACATTGCCGAAGGCAATCTGAATC CACTGTTCCAATGGCTGAAGCAGAATATCTGGCGTCACGGCAGCCGTTTCCCTACCAATACCCTGATCGCCAATGCGACC GGCGAGGCCCTGAACCCAGACTATTTCCGTAAGCATTTGGAAAGTCGTTACCTGTAA
Upstream 100 bases:
>100_bases GCCCACTTTCAATTTAAAAGCAGACCCGGTGTAACCCCGTTTACGTGGCAGCATAAAAACGCGAAACAGTGATCCGGTTT ACAAAAAATGGAGCTAAACG
Downstream 100 bases:
>100_bases GATCCCCAGGCACGGCTAATCCCGTGCCTTTTTCCCCCTGCTTTGCCGCCGCTATTCCATAGCGCACTTCCTCCACCCAA GACGCCCAGGCTGCAGAGTA
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTSAHSPSSYDELRAIFTRLSRFGHLSAIAGWDMQTMMPPGGSKARSEALAELSVLQHQILTSDKTGRLFERAQQETLDD IDQANLLEMRRQYDNAVLVPESLVEAKSLAGARCEHAWRSQRPANDWEGFAENLREVVKLSRQEAQIRAEAAGSSRYDAL LNLYEPGMRSSDIDRIFGDLKTWLPDLLQKVVAKQAQEPCLVPQGPFNVETQRQLSLSVMKLLGFNFDGGRVDVSAHPFC GGVPEDVRITTRYNDKEFLTALLGIVHETGHARYEQNLPREWLGQPVAQARSTAIHESQSLLFEMQLARGSDFLKILRPL VVKQFGEQPALEEGNFIRLNQRVKPGLIRVDADEVSYPAHVILRYEIEKALVEGEIEVEDIPALWGEKMHGYLGLDTIGN YRNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHSVRKALPTLDSDIAEGNLNPLFQWLKQNIWRHGSRFPTNTLIANAT GEALNPDYFRKHLESRYL
Sequences:
>Translated_498_residues MTSAHSPSSYDELRAIFTRLSRFGHLSAIAGWDMQTMMPPGGSKARSEALAELSVLQHQILTSDKTGRLFERAQQETLDD IDQANLLEMRRQYDNAVLVPESLVEAKSLAGARCEHAWRSQRPANDWEGFAENLREVVKLSRQEAQIRAEAAGSSRYDAL LNLYEPGMRSSDIDRIFGDLKTWLPDLLQKVVAKQAQEPCLVPQGPFNVETQRQLSLSVMKLLGFNFDGGRVDVSAHPFC GGVPEDVRITTRYNDKEFLTALLGIVHETGHARYEQNLPREWLGQPVAQARSTAIHESQSLLFEMQLARGSDFLKILRPL VVKQFGEQPALEEGNFIRLNQRVKPGLIRVDADEVSYPAHVILRYEIEKALVEGEIEVEDIPALWGEKMHGYLGLDTIGN YRNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHSVRKALPTLDSDIAEGNLNPLFQWLKQNIWRHGSRFPTNTLIANAT GEALNPDYFRKHLESRYL >Mature_497_residues TSAHSPSSYDELRAIFTRLSRFGHLSAIAGWDMQTMMPPGGSKARSEALAELSVLQHQILTSDKTGRLFERAQQETLDDI DQANLLEMRRQYDNAVLVPESLVEAKSLAGARCEHAWRSQRPANDWEGFAENLREVVKLSRQEAQIRAEAAGSSRYDALL NLYEPGMRSSDIDRIFGDLKTWLPDLLQKVVAKQAQEPCLVPQGPFNVETQRQLSLSVMKLLGFNFDGGRVDVSAHPFCG GVPEDVRITTRYNDKEFLTALLGIVHETGHARYEQNLPREWLGQPVAQARSTAIHESQSLLFEMQLARGSDFLKILRPLV VKQFGEQPALEEGNFIRLNQRVKPGLIRVDADEVSYPAHVILRYEIEKALVEGEIEVEDIPALWGEKMHGYLGLDTIGNY RNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHSVRKALPTLDSDIAEGNLNPLFQWLKQNIWRHGSRFPTNTLIANATG EALNPDYFRKHLESRYL
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 56253; Mature: 56122
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAHSPSSYDELRAIFTRLSRFGHLSAIAGWDMQTMMPPGGSKARSEALAELSVLQHQI CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH LTSDKTGRLFERAQQETLDDIDQANLLEMRRQYDNAVLVPESLVEAKSLAGARCEHAWRS HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEECHHHHHHHHHHCCHHHHHHHHC QRPANDWEGFAENLREVVKLSRQEAQIRAEAAGSSRYDALLNLYEPGMRSSDIDRIFGDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH KTWLPDLLQKVVAKQAQEPCLVPQGPFNVETQRQLSLSVMKLLGFNFDGGRVDVSAHPFC HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GGVPEDVRITTRYNDKEFLTALLGIVHETGHARYEQNLPREWLGQPVAQARSTAIHESQS CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHH LLFEMQLARGSDFLKILRPLVVKQFGEQPALEEGNFIRLNQRVKPGLIRVDADEVSYPAH HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEECHHHHCCCHH VILRYEIEKALVEGEIEVEDIPALWGEKMHGYLGLDTIGNYRNGCMQDIHWTDGAFGYFP EEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCH TYTLGAMYAAQLFHSVRKALPTLDSDIAEGNLNPLFQWLKQNIWRHGSRFPTNTLIANAT HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC GEALNPDYFRKHLESRYL CCCCCHHHHHHHHHHCCC >Mature Secondary Structure TSAHSPSSYDELRAIFTRLSRFGHLSAIAGWDMQTMMPPGGSKARSEALAELSVLQHQI CCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH LTSDKTGRLFERAQQETLDDIDQANLLEMRRQYDNAVLVPESLVEAKSLAGARCEHAWRS HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEECHHHHHHHHHHCCHHHHHHHHC QRPANDWEGFAENLREVVKLSRQEAQIRAEAAGSSRYDALLNLYEPGMRSSDIDRIFGDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH KTWLPDLLQKVVAKQAQEPCLVPQGPFNVETQRQLSLSVMKLLGFNFDGGRVDVSAHPFC HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GGVPEDVRITTRYNDKEFLTALLGIVHETGHARYEQNLPREWLGQPVAQARSTAIHESQS CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHH LLFEMQLARGSDFLKILRPLVVKQFGEQPALEEGNFIRLNQRVKPGLIRVDADEVSYPAH HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEECHHHHCCCHH VILRYEIEKALVEGEIEVEDIPALWGEKMHGYLGLDTIGNYRNGCMQDIHWTDGAFGYFP EEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCH TYTLGAMYAAQLFHSVRKALPTLDSDIAEGNLNPLFQWLKQNIWRHGSRFPTNTLIANAT HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC GEALNPDYFRKHLESRYL CCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]