| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is braC [H]
Identifier: 157370793
GI number: 157370793
Start: 2808643
End: 2809803
Strand: Direct
Name: braC [H]
Synonym: Spro_2553
Alternate gene names: 157370793
Gene position: 2808643-2809803 (Clockwise)
Preceding gene: 157370792
Following gene: 157370794
Centisome position: 51.55
GC content: 61.24
Gene sequence:
>1161_bases ATGAGCAAGATAACTCGCTTCAAGCTGTTGGCGCTGGCCGCCGCCGTTCTGGTCAGCCTGGGCGCGACATCGCCGGTTCA GGCCGATGAAACTATTTTGATCGGGCTGGCAGGCCCGCTGACCGGCCCTTCCGCCCGTATCGGCAAAGATTTGGAAAATG GCGCGCAGTTGGCCATCGCCGATGCCAACGCCCAGAAACCGACGCTGAAAGGCAAGCCGGTCACCTTTAAACTGCTGTCC GAGGACGATCAGTCAGACCCACGCACCGCCGTTGCGGTAGCCCAACGCCTGGTGGACGAAGGCGTTGCCGGCGTGGTCGG CCATTGGAACACCGGCACCAGCATCCCGGCGGCGCGTATTTACCACGACGCCGGGATTGCTCAGGTCGCACCGGTCGCCA CTGGCCACGGCTATACTCAGCAAGGGTTCGATACCAGCTTCCGCGTAATGGGCCACGACGATGACGGCGGTCATTATGCC GGCGACTATGCGGTGAAGGTGCTGAAGGCCAAGCGTATTGCGGTAATCGACGATCGCACCGCGTTCGGCCAGGGGCTGGC AGACGAGTTTATCAAGTCGTTGGCGGCTCAGGGCCTGCAACCGGTCGCGCGGGAGTATGTCGACGACAAGACCGTTGATT TCAGTGCGGTATTGACCACCGTGCGCAGCAAGAACGCCGATTTGATCTTCTTCGGCGGCGTCGACTCGCAGGCCGCCCCG CTGGCCCGACGCATCAAACAGTTGGGGATGAACACCCAACTGATGGGCGCAGGTGGCTTTGTCAGCCAGACTTTCCTGAC GCTGGCACAGAAAGAAGGTGAAGGCGTGGTGGCACTGGAGCCGGGCCTGCCGCTGGAACAGATGCCAGGCGGCAAAGCCT TTGAGCAGGCCTACCGTGACCGCTACAAAACCCATATCGAACTGCATGCGCCCTTCGCCTACGACGCTACGCGGGTATTG ATTGCCGCCATCGAGCAGGCGGGGTCCGCCGATCCGGCCGATTATCTGCCGAAGCTGCGCGCCATCCATTATCAGGGCGT CACAGGCACTATTGCGTTCGATGCACAGGGCAATCTGCAGCAGCCGAGTTTCACTCTTTACCGGGTGGTTGACGGCAAAT GGCAGCCGCAAAGCGTACTGGGCGGCGCAAAAGCACAATAA
Upstream 100 bases:
>100_bases CACTGTGGTCGCTCTGCCGACCTGCTGGACGATGAAAAAATCAAACAAGCCTATCTGGGCGAATAACCGCTTTTACTTTT AACCACACCGGGAGTTTTAC
Downstream 100 bases:
>100_bases CAATCCGCAAGGCAGTGAGGAGCAAGGCAATGAGCGAGGCAAAAAACGAATTGGGCATTCTGGCCCGACGCCGGATAGAG GCGGAAATCATCAAGCCAAT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSKITRFKLLALAAAVLVSLGATSPVQADETILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLKGKPVTFKLLS EDDQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHGYTQQGFDTSFRVMGHDDDGGHYA GDYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGLQPVAREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAP LARRIKQLGMNTQLMGAGGFVSQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVL IAAIEQAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQQPSFTLYRVVDGKWQPQSVLGGAKAQ
Sequences:
>Translated_386_residues MSKITRFKLLALAAAVLVSLGATSPVQADETILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLKGKPVTFKLLS EDDQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHGYTQQGFDTSFRVMGHDDDGGHYA GDYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGLQPVAREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAP LARRIKQLGMNTQLMGAGGFVSQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVL IAAIEQAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQQPSFTLYRVVDGKWQPQSVLGGAKAQ >Mature_385_residues SKITRFKLLALAAAVLVSLGATSPVQADETILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLKGKPVTFKLLSE DDQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHGYTQQGFDTSFRVMGHDDDGGHYAG DYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGLQPVAREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAPL ARRIKQLGMNTQLMGAGGFVSQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVLI AAIEQAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQQPSFTLYRVVDGKWQPQSVLGGAKAQ
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=353, Percent_Identity=30.3116147308782, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI48994941, Length=338, Percent_Identity=29.585798816568, Blast_Score=158, Evalue=7e-40,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40898; Mature: 40767
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKITRFKLLALAAAVLVSLGATSPVQADETILIGLAGPLTGPSARIGKDLENGAQLAIA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEE DANAQKPTLKGKPVTFKLLSEDDQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARI ECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH YHDAGIAQVAPVATGHGYTQQGFDTSFRVMGHDDDGGHYAGDYAVKVLKAKRIAVIDDRT HHHCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHCEEEEEECCH AFGQGLADEFIKSLAAQGLQPVAREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAP HHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH LARRIKQLGMNTQLMGAGGFVSQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHH RYKTHIELHAPFAYDATRVLIAAIEQAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQ HHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCC QPSFTLYRVVDGKWQPQSVLGGAKAQ CCCEEEEEEECCCCCCHHHCCCCCCC >Mature Secondary Structure SKITRFKLLALAAAVLVSLGATSPVQADETILIGLAGPLTGPSARIGKDLENGAQLAIA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEE DANAQKPTLKGKPVTFKLLSEDDQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARI ECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH YHDAGIAQVAPVATGHGYTQQGFDTSFRVMGHDDDGGHYAGDYAVKVLKAKRIAVIDDRT HHHCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHCEEEEEECCH AFGQGLADEFIKSLAAQGLQPVAREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAP HHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH LARRIKQLGMNTQLMGAGGFVSQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHH RYKTHIELHAPFAYDATRVLIAAIEQAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQ HHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCC QPSFTLYRVVDGKWQPQSVLGGAKAQ CCCEEEEEEECCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]