| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fbpB [H]
Identifier: 157370775
GI number: 157370775
Start: 2788040
End: 2789623
Strand: Direct
Name: fbpB [H]
Synonym: Spro_2535
Alternate gene names: 157370775
Gene position: 2788040-2789623 (Clockwise)
Preceding gene: 157370774
Following gene: 157370776
Centisome position: 51.17
GC content: 60.29
Gene sequence:
>1584_bases ATGTCGAATACAGGTCTCAACGCCGCCGGCTCAAAGCCACGGTATACTTCCGCCCGCCGCCATCAGCGGCCCGGGTTGTT TATCGTGGCGGTCGCCATTTTACTCTCCCTGCTGGCGCTATTGCCGCTGGGGTTTGTCATTAGCGTGGCGTTTGAAACCG GTTGGCCAACGGTAAAAGCTCTGGTATTGCGCCCCCGGGTGGCCGAACTGCTGCTCAACACGCTGCTGTTGGTGGTGTTC ACGCTGCCGATTTGCGCCATTCTGGGGGTAGCGCTGGCCTGGCTAACCGAACGCACTACGCTGCCGGGCCGTCGCATTTG GTCGTTATTGGCCACCGCGCCGCTGGCGGTGCCGGCATTCGTACAGAGCTACGCCTGGATCAGTCTGGTGCCTTCGATGC ATGGGTTGGGAGCCGGGGTATTTATTTCGGTCATCGCCTACTTCCCCTTTATTTATCTGCCAACCGCTGCGGTATTACGC CGCTTGGATCCCGGAATTGAAGACGTCGCCACTTCGCTCGGTACGCGCCCGCTGGCGGTATTTTTCCGCGTGGTGCTGCC ACAGCTAAAACTGGCAGTTTGGGGTGGCTCGCTGCTGATCGCACTGCATCTGCTGGCCGAGTACGGCCTGTATGCGATGA TCCGCTTTGACACCTTCACTACCGCTATTTTCGACCAGTTCCAATCGACCTTTAACGGCCCGGCGGCCAATATGCTGGCC GGGGTGCTGGTGCTGTGCTGCCTGGGATTATTAATGCTGGAAGCCGTCAGCCGTGGGCGAGCGCGTTATGCCCGCGTCGG TTCCGGCAGTGCGCGCAGTCAAACGGCTTATCGCCTTGGGCCCATCACCACCCTGTTCTGCCTGCTGCTGCCCCTGAGCC TCACCGCGCTGGCGCTTGGCGTGCCTTTTATCACCTTGGCCCGTTGGTTGACCTTGGGAGGCGTTGAGGTGTGGCGCAAC AGCGAATTGCTGCCTGCCTTGCTGCAAACATTGTCACTGGCCGCCAGTGGTGCGCTGCTGATCACGCTGTGCGCTATCCC TATGGCCTGGCTGTCGGTACGCTACCCGGCACGGCTGTATCGGGTATTGGAAGGCTGTAATTACATCACCAGTTCACTGC CCGGCATTGTGGTGGCACTGGCGCTGGTGACCATCACCATTCACAGTTTTCGACCGATTTATCAGACTGAAATCACCCTG CTGCTGGCCTACCTGCTGATGTTTATGCCACGGGCGCTGATCAACCTGCGCGCGGGGATTGCCCAGGCACCGGTCGAGTT AGAAAACGTGGCCCGTAGTCTCGGTCGTTCGCCAGCGGCAGCATTATGGAGCACCACGCTGCGTCTGGCGGCCCCCGGAG CCGCCGCCGGTGCCGCACTGGTGTTTCTGGCTATCACCAATGAGCTGACCGCCACGCTGCTGCTGGCCCCCAACGGTACC CGCACGCTGGCCACCGGCTTCTGGGCGCTGACCAGCGAGATAGACTATATGGCGGCCGCACCCTACGCCCTGATTATGGT GGTGTTGTCATTGCCACTGACCTGGCTTCTTTATTCTCAATCCAAACGTACGGCGGGATTATGA
Upstream 100 bases:
>100_bases AGTTGACGCTTCTGCATTGAACGGTAAAAAAGTGGTCGAACTGATGACTCAAGCCGGGCTGATGTAAGCCGGTTGATTAG TACAGAGAGTTTTTAGCCCT
Downstream 100 bases:
>100_bases GCACGCTTGAACTGCAAGGCATCGGTAAATCCTATAACTCGGTCAGGGTGCTCGAGCATGTTGATTTAAACGTGGCACAG GGCAGCCGTACGGCGATTGT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; putrescine [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein sfuB [H]
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MSNTGLNAAGSKPRYTSARRHQRPGLFIVAVAILLSLLALLPLGFVISVAFETGWPTVKALVLRPRVAELLLNTLLLVVF TLPICAILGVALAWLTERTTLPGRRIWSLLATAPLAVPAFVQSYAWISLVPSMHGLGAGVFISVIAYFPFIYLPTAAVLR RLDPGIEDVATSLGTRPLAVFFRVVLPQLKLAVWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLA GVLVLCCLGLLMLEAVSRGRARYARVGSGSARSQTAYRLGPITTLFCLLLPLSLTALALGVPFITLARWLTLGGVEVWRN SELLPALLQTLSLAASGALLITLCAIPMAWLSVRYPARLYRVLEGCNYITSSLPGIVVALALVTITIHSFRPIYQTEITL LLAYLLMFMPRALINLRAGIAQAPVELENVARSLGRSPAAALWSTTLRLAAPGAAAGAALVFLAITNELTATLLLAPNGT RTLATGFWALTSEIDYMAAAPYALIMVVLSLPLTWLLYSQSKRTAGL
Sequences:
>Translated_527_residues MSNTGLNAAGSKPRYTSARRHQRPGLFIVAVAILLSLLALLPLGFVISVAFETGWPTVKALVLRPRVAELLLNTLLLVVF TLPICAILGVALAWLTERTTLPGRRIWSLLATAPLAVPAFVQSYAWISLVPSMHGLGAGVFISVIAYFPFIYLPTAAVLR RLDPGIEDVATSLGTRPLAVFFRVVLPQLKLAVWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLA GVLVLCCLGLLMLEAVSRGRARYARVGSGSARSQTAYRLGPITTLFCLLLPLSLTALALGVPFITLARWLTLGGVEVWRN SELLPALLQTLSLAASGALLITLCAIPMAWLSVRYPARLYRVLEGCNYITSSLPGIVVALALVTITIHSFRPIYQTEITL LLAYLLMFMPRALINLRAGIAQAPVELENVARSLGRSPAAALWSTTLRLAAPGAAAGAALVFLAITNELTATLLLAPNGT RTLATGFWALTSEIDYMAAAPYALIMVVLSLPLTWLLYSQSKRTAGL >Mature_526_residues SNTGLNAAGSKPRYTSARRHQRPGLFIVAVAILLSLLALLPLGFVISVAFETGWPTVKALVLRPRVAELLLNTLLLVVFT LPICAILGVALAWLTERTTLPGRRIWSLLATAPLAVPAFVQSYAWISLVPSMHGLGAGVFISVIAYFPFIYLPTAAVLRR LDPGIEDVATSLGTRPLAVFFRVVLPQLKLAVWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLAG VLVLCCLGLLMLEAVSRGRARYARVGSGSARSQTAYRLGPITTLFCLLLPLSLTALALGVPFITLARWLTLGGVEVWRNS ELLPALLQTLSLAASGALLITLCAIPMAWLSVRYPARLYRVLEGCNYITSSLPGIVVALALVTITIHSFRPIYQTEITLL LAYLLMFMPRALINLRAGIAQAPVELENVARSLGRSPAAALWSTTLRLAAPGAAAGAALVFLAITNELTATLLLAPNGTR TLATGFWALTSEIDYMAAAPYALIMVVLSLPLTWLLYSQSKRTAGL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56624; Mature: 56493
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTGLNAAGSKPRYTSARRHQRPGLFIVAVAILLSLLALLPLGFVISVAFETGWPTVKA CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LVLRPRVAELLLNTLLLVVFTLPICAILGVALAWLTERTTLPGRRIWSLLATAPLAVPAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VQSYAWISLVPSMHGLGAGVFISVIAYFPFIYLPTAAVLRRLDPGIEDVATSLGTRPLAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH FFRVVLPQLKLAVWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLA HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH GVLVLCCLGLLMLEAVSRGRARYARVGSGSARSQTAYRLGPITTLFCLLLPLSLTALALG HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VPFITLARWLTLGGVEVWRNSELLPALLQTLSLAASGALLITLCAIPMAWLSVRYPARLY HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RVLEGCNYITSSLPGIVVALALVTITIHSFRPIYQTEITLLLAYLLMFMPRALINLRAGI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAPVELENVARSLGRSPAAALWSTTLRLAAPGAAAGAALVFLAITNELTATLLLAPNGT HHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCC RTLATGFWALTSEIDYMAAAPYALIMVVLSLPLTWLLYSQSKRTAGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNTGLNAAGSKPRYTSARRHQRPGLFIVAVAILLSLLALLPLGFVISVAFETGWPTVKA CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LVLRPRVAELLLNTLLLVVFTLPICAILGVALAWLTERTTLPGRRIWSLLATAPLAVPAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VQSYAWISLVPSMHGLGAGVFISVIAYFPFIYLPTAAVLRRLDPGIEDVATSLGTRPLAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH FFRVVLPQLKLAVWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLA HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH GVLVLCCLGLLMLEAVSRGRARYARVGSGSARSQTAYRLGPITTLFCLLLPLSLTALALG HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VPFITLARWLTLGGVEVWRNSELLPALLQTLSLAASGALLITLCAIPMAWLSVRYPARLY HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RVLEGCNYITSSLPGIVVALALVTITIHSFRPIYQTEITLLLAYLLMFMPRALINLRAGI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAPVELENVARSLGRSPAAALWSTTLRLAAPGAAAGAALVFLAITNELTATLLLAPNGT HHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCC RTLATGFWALTSEIDYMAAAPYALIMVVLSLPLTWLLYSQSKRTAGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; putrescine [Periplasm]; H2O [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]