| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ycjY [C]
Identifier: 157370697
GI number: 157370697
Start: 2691486
End: 2692499
Strand: Direct
Name: ycjY [C]
Synonym: Spro_2457
Alternate gene names: 157370697
Gene position: 2691486-2692499 (Clockwise)
Preceding gene: 157370696
Following gene: 157370698
Centisome position: 49.4
GC content: 48.22
Gene sequence:
>1014_bases ATGTTATTGGGGCTGTTAATCAGCTCGTTTGCTGCCACAGGAGCCGATATGTCTAACGGAGCAGATAACTTTTACCAAAG CAATAAAGTCACCCAACAAAAGGTGACCTTTAAAAACCAGTACCAGATGAATGTGGTCGGCAATCTGTTTATGCCGAAAG GAATGGAGCAGAACGCTAAAAACCCGGCTATCGTTGTTGGTCATCCGATGGGGGCGGTAAAAGAACAAAGTTCAAACTTA TATGCCCAGAAACTGGCGGAACAAGGGTTTGTGACGCTGGCAATTGATCTGTCCTTCTGGGGTGAGAGCGATGGCAAACC CGGTCATCTGATTTCTCCGGAAATTTACGCGGATGACTTTAGTGCTGCCGTCGATTATCTGAGTACTCAGCCTTACGTGG ATGCGGAGAAAATTGGCGTGTTGGGTATCTGCGGTAGCGGGAGCTTTGTCATCAGTGCGGCCAAAATTGACCCGAGAATG AAAGCCATTGCCACTGTCAGCATGTATGACATGGGGTCTGTTTTCCGTAATGGTCTTCATCATTCGGTTACGTCAGAACA GCGTAAAGCCTTGATTAAATCGGCTACCGAACAGCGCTTTGTTGAGTCTAAAGGCGGTGATATCGCCTATATCCCAGGGA CCGTGAACCAACTGGATGATTCAACATCTGCGATTCAGAGAGAATTCTTCGATTTTTACCGTACATCGCGTGGCGGCTAC ACGCCAAAAGGCGAGCAAGAAGAACTGACGACCAAGCCCATGTTAAGCAGCATTGGGAAGTTTATGAACTTCTACCCGTT CAATGATATTGAAACGATCTCGCCACGCCCGATGCTGTTCATCACCGGCAGTCAGGCGCATTCGAAAGAATTTAGCGAAG ATGCTTACCAAGGTGCCGGACAACCGAAAGAGTTGTACATCGTCCCAGGCGCAGGCCATGTCGATCTGTACGACCGTACC GACCTGATCCCTTTTGCCAAGCTGACGTCGTTCTTTAAAACCAACCTGAAATAA
Upstream 100 bases:
>100_bases AGCATCGTTTTATTAGTGATCGCGGCTGCCCTGACTTTATGGACGTCACGTAAAGATCTCTACCAAACCAATTGAGGATT ATTCAGTGAGAACATTAACC
Downstream 100 bases:
>100_bases CCTTTTATGCCGCATCCTCAGGGATGTGGCTAATTTTTCCCCCTGGCAAAGCCCCTTTTGAGCCTGTTCTCACTCCCTAA GTATTATTGCTTCCCCACCC
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLLGLLISSFAATGADMSNGADNFYQSNKVTQQKVTFKNQYQMNVVGNLFMPKGMEQNAKNPAIVVGHPMGAVKEQSSNL YAQKLAEQGFVTLAIDLSFWGESDGKPGHLISPEIYADDFSAAVDYLSTQPYVDAEKIGVLGICGSGSFVISAAKIDPRM KAIATVSMYDMGSVFRNGLHHSVTSEQRKALIKSATEQRFVESKGGDIAYIPGTVNQLDDSTSAIQREFFDFYRTSRGGY TPKGEQEELTTKPMLSSIGKFMNFYPFNDIETISPRPMLFITGSQAHSKEFSEDAYQGAGQPKELYIVPGAGHVDLYDRT DLIPFAKLTSFFKTNLK
Sequences:
>Translated_337_residues MLLGLLISSFAATGADMSNGADNFYQSNKVTQQKVTFKNQYQMNVVGNLFMPKGMEQNAKNPAIVVGHPMGAVKEQSSNL YAQKLAEQGFVTLAIDLSFWGESDGKPGHLISPEIYADDFSAAVDYLSTQPYVDAEKIGVLGICGSGSFVISAAKIDPRM KAIATVSMYDMGSVFRNGLHHSVTSEQRKALIKSATEQRFVESKGGDIAYIPGTVNQLDDSTSAIQREFFDFYRTSRGGY TPKGEQEELTTKPMLSSIGKFMNFYPFNDIETISPRPMLFITGSQAHSKEFSEDAYQGAGQPKELYIVPGAGHVDLYDRT DLIPFAKLTSFFKTNLK >Mature_337_residues MLLGLLISSFAATGADMSNGADNFYQSNKVTQQKVTFKNQYQMNVVGNLFMPKGMEQNAKNPAIVVGHPMGAVKEQSSNL YAQKLAEQGFVTLAIDLSFWGESDGKPGHLISPEIYADDFSAAVDYLSTQPYVDAEKIGVLGICGSGSFVISAAKIDPRM KAIATVSMYDMGSVFRNGLHHSVTSEQRKALIKSATEQRFVESKGGDIAYIPGTVNQLDDSTSAIQREFFDFYRTSRGGY TPKGEQEELTTKPMLSSIGKFMNFYPFNDIETISPRPMLFITGSQAHSKEFSEDAYQGAGQPKELYIVPGAGHVDLYDRT DLIPFAKLTSFFKTNLK
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjY [H]
Homologues:
Organism=Escherichia coli, GI221142683, Length=311, Percent_Identity=35.048231511254, Blast_Score=182, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 37001; Mature: 37001
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGLLISSFAATGADMSNGADNFYQSNKVTQQKVTFKNQYQMNVVGNLFMPKGMEQNAK CHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCC NPAIVVGHPMGAVKEQSSNLYAQKLAEQGFVTLAIDLSFWGESDGKPGHLISPEIYADDF CCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEECCCHHHCHH SAAVDYLSTQPYVDAEKIGVLGICGSGSFVISAAKIDPRMKAIATVSMYDMGSVFRNGLH HHHHHHHCCCCCCCHHHCCEEEEECCCCEEEEEECCCCHHHHHEEHHHHHHHHHHHCCCC HSVTSEQRKALIKSATEQRFVESKGGDIAYIPGTVNQLDDSTSAIQREFFDFYRTSRGGY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCC TPKGEQEELTTKPMLSSIGKFMNFYPFNDIETISPRPMLFITGSQAHSKEFSEDAYQGAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC QPKELYIVPGAGHVDLYDRTDLIPFAKLTSFFKTNLK CCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLLGLLISSFAATGADMSNGADNFYQSNKVTQQKVTFKNQYQMNVVGNLFMPKGMEQNAK CHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCC NPAIVVGHPMGAVKEQSSNLYAQKLAEQGFVTLAIDLSFWGESDGKPGHLISPEIYADDF CCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEECCCHHHCHH SAAVDYLSTQPYVDAEKIGVLGICGSGSFVISAAKIDPRMKAIATVSMYDMGSVFRNGLH HHHHHHHCCCCCCCHHHCCEEEEECCCCEEEEEECCCCHHHHHEEHHHHHHHHHHHCCCC HSVTSEQRKALIKSATEQRFVESKGGDIAYIPGTVNQLDDSTSAIQREFFDFYRTSRGGY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCC TPKGEQEELTTKPMLSSIGKFMNFYPFNDIETISPRPMLFITGSQAHSKEFSEDAYQGAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC QPKELYIVPGAGHVDLYDRTDLIPFAKLTSFFKTNLK CCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1427017; 10984043 [H]