| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370694
Identifier: 157370694
GI number: 157370694
Start: 2687015
End: 2689069
Strand: Direct
Name: 157370694
Synonym: Spro_2454
Alternate gene names: NA
Gene position: 2687015-2689069 (Clockwise)
Preceding gene: 157370693
Following gene: 157370696
Centisome position: 49.31
GC content: 53.87
Gene sequence:
>2055_bases ATGTTCGGTAAAACAAAAAATTATAAAAAACACCCTCTGTCACTGCATATTACTGCGGCGATGCCTTTGTTTGCTCTGGT GGCCTTTAACGGCCATGCCGCAGAACAGCATCAGCATGATGTTGCCGTCAAAACCAACGACGGTGACGTCATTACCGTGA CTGCGCCACTCTATTCACCGATGACCATAGTGACGTCCCCTAAAACACCGCGTCAGCCGGTGCCGGCCAGCGATGGTTCT GATTATCTGAAAACCATTCCAGGCTTCTCGCAAATCCGTAACGGCGGCACCAATGGCGATCCGGTGTTTCGCGGCATGTT TGGCTCACGACTGAAAATTCTGACCGACGGCGGCGAAATGTTGGGTGCCTGTCCGGCAAGGATGGACGCCCCTACTTCCT ATATCTCGCCGGAAAGTTATGATCTGCTGACCATCACCAAAGGTCCGCAGACGGTGCTCTGGGGGCCAGGTTCCTCAGCG GGAACAGTACGTTTCGAACGTGAGCGTCCGCGCTTTGAACAGCCCGGCATCAAGGGCAATGCCAGCGTATTGGCCGGTTC TAACGGTCGCTGGGATGAAAATATCGATGCCAGTCTGGGGGGCGAACAAGGCTATTTACGCCTGATGGGCAACAAATCTC GCTCCAACGACTATAAGGATGGCAATGGCGACCGCGTACCATCACGCTGGGATAAATGGAATGGTGATTTGGCGCTGGGC TGGACGCCAGACAGCGATACTCTGTTGGAAGTGACCATGGGCCGGGGTAATGGTGAGGCTCGTTATGCCGGGCGCAGCAT GGACGGTTCACAGTTCAAGCGTGAAAGTCTGGGCATGCGGTTTGAAAAATCCAACATTGGTGAGGTGCTGGATAAACTTG AAGCTCAGGTTTATTACAACTACGCCAACCATATTATGGATAACGTCACCCTTCGCTCCCCCGGTCAGGGTGGCATGGCG ATGGGACATATGGGCATGGGTCATATGAATATGGGGATGACGATGCAACTGGATCGCCGCACCGTCGGCGGGCGCGTCAT GGGTACCTGGCTATGGCAAGATTTCAAGTTGGAAAGCGGTATGGATACGCAAACCAACACTCACCGCAATAGACAGGGTG ACGGCTGGCAGAAAGATGCGCAATTTCATAACTACGGTGCTTTTGGCGAGCTGACCTGGACCGCGACCGAACAAAGCAAA GTGATCAGCGGTGCACGCCTCGATCGCAGCCTGGTGGATAACTATCAATCGGCTAATGAGCGTGAACGTTCCGATACCCT GCCTAGCGGTTTTACGCGCATTGAGCATACGCTTGCCGGCATGCCGCTGATGGTTTATGCCGGGATTGGCTATACCGAAC GTTTCCCTGACTACTGGGAACTGTTCTCCCCGACTTTGGGGCCGAACGGCAGTAAAAGCCCGTTTGATAGCGTGAAAAGT GAAAAGACCACGCAAATCGATATCGGCGCTCAATACACCGATAAACGCTTTAACAGCTGGGTGTCCGCGTACCTGGGTCA TGTGAATGACTTTATCCTGTTCAAATACGATCCGCACCATGCTCGTATCAGTCAGGCCGATAACGTGAACGCCACAATTA TGGGCGGTGAAATGGGCATGGGTTACCAACTTGCCGAGCACTGGAAAACCGATGCCAGCCTGGCCTATGCCTGGGGTAAA AACACTACTGACCACCAGCCACTGCCGCAAATACCGCCGCTGGAAGCACGCTTAGGTTTAACCTACGAACGTGGCGACTG GAGCAGCACCGGCCTTTGGCGTCTGGTCAGTAGCCAGCACCGTGTGGCGATCAATCAGGGTAACGTGGTGGGTAAAGACT TTGCCGACAGTCCGGGCTTTGGCGTGCTTTCCGCCAATGTGGCCTACAAGGTCACTCCGCAGGTCAAACTCAGCACCGGC CTGGATAACATCTTCAACAAAACCTACAGCGAGCATCTCAATCTGGCAGGCAACAGCACCTTCGGTTATTCATCGAATAC TTCGGTAAATGAGCCAGGGCGCACCCTCTGGGCCAAGGTCAACGTCACCTTCTAA
Upstream 100 bases:
>100_bases TTTACGGCGGCATGATGCTCCGGGCATCACTGCGTCTAAATAATAACCGGTCGTGATGTGAAAATACGTTTAGCGTCAAA ATTTGCATTAAGGAACGATG
Downstream 100 bases:
>100_bases CTAAACCGAGCCGGGTGGTGATTATCATCGCCCGGCAAAGATTTTTGCCCAAGTGACTTGGGCGGGTCTGCATTTTCACC CTACCCGAAGCGCTTCAACA
Product: TonB-dependent copper receptor
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Protein OprC; Outer Membrane Protein; Outer Membrane Protein OprC Complement; Outer Membrane Heme Receptor; NB System Receptor; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Protein; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; NB-Dependent Copper Receptor Protein; Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MFGKTKNYKKHPLSLHITAAMPLFALVAFNGHAAEQHQHDVAVKTNDGDVITVTAPLYSPMTIVTSPKTPRQPVPASDGS DYLKTIPGFSQIRNGGTNGDPVFRGMFGSRLKILTDGGEMLGACPARMDAPTSYISPESYDLLTITKGPQTVLWGPGSSA GTVRFERERPRFEQPGIKGNASVLAGSNGRWDENIDASLGGEQGYLRLMGNKSRSNDYKDGNGDRVPSRWDKWNGDLALG WTPDSDTLLEVTMGRGNGEARYAGRSMDGSQFKRESLGMRFEKSNIGEVLDKLEAQVYYNYANHIMDNVTLRSPGQGGMA MGHMGMGHMNMGMTMQLDRRTVGGRVMGTWLWQDFKLESGMDTQTNTHRNRQGDGWQKDAQFHNYGAFGELTWTATEQSK VISGARLDRSLVDNYQSANERERSDTLPSGFTRIEHTLAGMPLMVYAGIGYTERFPDYWELFSPTLGPNGSKSPFDSVKS EKTTQIDIGAQYTDKRFNSWVSAYLGHVNDFILFKYDPHHARISQADNVNATIMGGEMGMGYQLAEHWKTDASLAYAWGK NTTDHQPLPQIPPLEARLGLTYERGDWSSTGLWRLVSSQHRVAINQGNVVGKDFADSPGFGVLSANVAYKVTPQVKLSTG LDNIFNKTYSEHLNLAGNSTFGYSSNTSVNEPGRTLWAKVNVTF
Sequences:
>Translated_684_residues MFGKTKNYKKHPLSLHITAAMPLFALVAFNGHAAEQHQHDVAVKTNDGDVITVTAPLYSPMTIVTSPKTPRQPVPASDGS DYLKTIPGFSQIRNGGTNGDPVFRGMFGSRLKILTDGGEMLGACPARMDAPTSYISPESYDLLTITKGPQTVLWGPGSSA GTVRFERERPRFEQPGIKGNASVLAGSNGRWDENIDASLGGEQGYLRLMGNKSRSNDYKDGNGDRVPSRWDKWNGDLALG WTPDSDTLLEVTMGRGNGEARYAGRSMDGSQFKRESLGMRFEKSNIGEVLDKLEAQVYYNYANHIMDNVTLRSPGQGGMA MGHMGMGHMNMGMTMQLDRRTVGGRVMGTWLWQDFKLESGMDTQTNTHRNRQGDGWQKDAQFHNYGAFGELTWTATEQSK VISGARLDRSLVDNYQSANERERSDTLPSGFTRIEHTLAGMPLMVYAGIGYTERFPDYWELFSPTLGPNGSKSPFDSVKS EKTTQIDIGAQYTDKRFNSWVSAYLGHVNDFILFKYDPHHARISQADNVNATIMGGEMGMGYQLAEHWKTDASLAYAWGK NTTDHQPLPQIPPLEARLGLTYERGDWSSTGLWRLVSSQHRVAINQGNVVGKDFADSPGFGVLSANVAYKVTPQVKLSTG LDNIFNKTYSEHLNLAGNSTFGYSSNTSVNEPGRTLWAKVNVTF >Mature_684_residues MFGKTKNYKKHPLSLHITAAMPLFALVAFNGHAAEQHQHDVAVKTNDGDVITVTAPLYSPMTIVTSPKTPRQPVPASDGS DYLKTIPGFSQIRNGGTNGDPVFRGMFGSRLKILTDGGEMLGACPARMDAPTSYISPESYDLLTITKGPQTVLWGPGSSA GTVRFERERPRFEQPGIKGNASVLAGSNGRWDENIDASLGGEQGYLRLMGNKSRSNDYKDGNGDRVPSRWDKWNGDLALG WTPDSDTLLEVTMGRGNGEARYAGRSMDGSQFKRESLGMRFEKSNIGEVLDKLEAQVYYNYANHIMDNVTLRSPGQGGMA MGHMGMGHMNMGMTMQLDRRTVGGRVMGTWLWQDFKLESGMDTQTNTHRNRQGDGWQKDAQFHNYGAFGELTWTATEQSK VISGARLDRSLVDNYQSANERERSDTLPSGFTRIEHTLAGMPLMVYAGIGYTERFPDYWELFSPTLGPNGSKSPFDSVKS EKTTQIDIGAQYTDKRFNSWVSAYLGHVNDFILFKYDPHHARISQADNVNATIMGGEMGMGYQLAEHWKTDASLAYAWGK NTTDHQPLPQIPPLEARLGLTYERGDWSSTGLWRLVSSQHRVAINQGNVVGKDFADSPGFGVLSANVAYKVTPQVKLSTG LDNIFNKTYSEHLNLAGNSTFGYSSNTSVNEPGRTLWAKVNVTF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75498; Mature: 75498
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGKTKNYKKHPLSLHITAAMPLFALVAFNGHAAEQHQHDVAVKTNDGDVITVTAPLYSP CCCCCCCCCCCCEEEEEEHHHCCHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC MTIVTSPKTPRQPVPASDGSDYLKTIPGFSQIRNGGTNGDPVFRGMFGSRLKILTDGGEM EEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCHHHCCCCCEEEEEECCCHH LGACPARMDAPTSYISPESYDLLTITKGPQTVLWGPGSSAGTVRFERERPRFEQPGIKGN EECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCC ASVLAGSNGRWDENIDASLGGEQGYLRLMGNKSRSNDYKDGNGDRVPSRWDKWNGDLALG CEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEE WTPDSDTLLEVTMGRGNGEARYAGRSMDGSQFKRESLGMRFEKSNIGEVLDKLEAQVYYN ECCCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHEEEH YANHIMDNVTLRSPGQGGMAMGHMGMGHMNMGMTMQLDRRTVGGRVMGTWLWQDFKLESG HHHHHHHCCEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCC MDTQTNTHRNRQGDGWQKDAQFHNYGAFGELTWTATEQSKVISGARLDRSLVDNYQSANE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHHCCH RERSDTLPSGFTRIEHTLAGMPLMVYAGIGYTERFPDYWELFSPTLGPNGSKSPFDSVKS HHHHCCCCCHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHCCCCCCCCCCCCHHHHCC EKTTQIDIGAQYTDKRFNSWVSAYLGHVNDFILFKYDPHHARISQADNVNATIMGGEMGM CCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCC GYQLAEHWKTDASLAYAWGKNTTDHQPLPQIPPLEARLGLTYERGDWSSTGLWRLVSSQH CHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCHHEECCCCC RVAINQGNVVGKDFADSPGFGVLSANVAYKVTPQVKLSTGLDNIFNKTYSEHLNLAGNST EEEEECCCEECCCCCCCCCCEEEECCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCC FGYSSNTSVNEPGRTLWAKVNVTF CCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MFGKTKNYKKHPLSLHITAAMPLFALVAFNGHAAEQHQHDVAVKTNDGDVITVTAPLYSP CCCCCCCCCCCCEEEEEEHHHCCHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC MTIVTSPKTPRQPVPASDGSDYLKTIPGFSQIRNGGTNGDPVFRGMFGSRLKILTDGGEM EEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCHHHCCCCCEEEEEECCCHH LGACPARMDAPTSYISPESYDLLTITKGPQTVLWGPGSSAGTVRFERERPRFEQPGIKGN EECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCC ASVLAGSNGRWDENIDASLGGEQGYLRLMGNKSRSNDYKDGNGDRVPSRWDKWNGDLALG CEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEE WTPDSDTLLEVTMGRGNGEARYAGRSMDGSQFKRESLGMRFEKSNIGEVLDKLEAQVYYN ECCCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHEEEH YANHIMDNVTLRSPGQGGMAMGHMGMGHMNMGMTMQLDRRTVGGRVMGTWLWQDFKLESG HHHHHHHCCEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCC MDTQTNTHRNRQGDGWQKDAQFHNYGAFGELTWTATEQSKVISGARLDRSLVDNYQSANE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHHCCH RERSDTLPSGFTRIEHTLAGMPLMVYAGIGYTERFPDYWELFSPTLGPNGSKSPFDSVKS HHHHCCCCCHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHCCCCCCCCCCCCHHHHCC EKTTQIDIGAQYTDKRFNSWVSAYLGHVNDFILFKYDPHHARISQADNVNATIMGGEMGM CCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCC GYQLAEHWKTDASLAYAWGKNTTDHQPLPQIPPLEARLGLTYERGDWSSTGLWRLVSSQH CHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCHHEECCCCC RVAINQGNVVGKDFADSPGFGVLSANVAYKVTPQVKLSTGLDNIFNKTYSEHLNLAGNST EEEEECCCEECCCCCCCCCCEEEECCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCC FGYSSNTSVNEPGRTLWAKVNVTF CCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA