| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is glnH [H]
Identifier: 157369722
GI number: 157369722
Start: 1614883
End: 1615626
Strand: Reverse
Name: glnH [H]
Synonym: Spro_1479
Alternate gene names: 157369722
Gene position: 1615626-1614883 (Counterclockwise)
Preceding gene: 157369723
Following gene: 157369721
Centisome position: 29.65
GC content: 52.02
Gene sequence:
>744_bases ATGAAGTCAATTTTTAAAGTCTCCCTGGCCGCCCTTTCGCTGGCCTTTGCCGTAAGCTCCCACGCAGCAGACAAACTGGT CGTCGCCACCGACACCGCATTCGTTCCTTTTGAGTTCAAGCAAGGCGACAAATATGTCGGCTTCGATATCGACCTGTGGG CCGCTATCGCCAAAGAACTGAAACTGGATTACACCCTGAAACCAATGGATTTCAGCGGCATCATCCCGGCACTGCAAACC AAAAACATCGATCTGGCGCTGGCCGGTATCACCATTACTGAAGAACGTAAAAAAGCCATCGAATTCTCCGACGGCTACTA CAAAAGCGGCCTGCTGGTGATGGTTAATGCCAACGACAACAACATCAAGGGCATTGACGATCTGAACGGTAAAGTGGTGG CGGTGAAGAGCGGCACCGGTTCCGTTGATTACGCCAAACAACACATCAAAACCAAAGACCTGCGTCAGTTCCCGAACATC GATAACGCCTATATGGAACTGGGCACCAAGCGTGCCGATGCGGTGCTGCACGACACGCCAAACATCCTGTACTTCATCAA AACTGCCGGCGCCGGCAAGTTCAAAACCGTGGGTGAATCACTGGAAGCTCAGCAATACGGCATCGCCTTCCCGAAAGGCA GTGACGAGCTGCGCGTGAAGGTCAATGGCGCGCTGAAAACGCTGCGCGACAACGGCACCTACAACGAAATCTACAAAAAA TGGTTCGGTACCGAACCTAAATAA
Upstream 100 bases:
>100_bases TTTGTTTTTATAGTAGTTGAAAAGATGGCACGATTCTTTCATGGCACCAACTGCAATATAAAAAATGGGTAATCCGCAAC CTGTACAGGAAATTCCTCTC
Downstream 100 bases:
>100_bases CGGATGAAGTCAGTCACTGATTCACTTGAGCACAGGGGTGGTGTCTTAGCCCCTGCGCTTTGTTGCATCTGATTCCCACG TTTGGGATCACCGGGAGAAA
Product: glutamine ABC transporter periplasmic protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKSIFKVSLAALSLAFAVSSHAADKLVVATDTAFVPFEFKQGDKYVGFDIDLWAAIAKELKLDYTLKPMDFSGIIPALQT KNIDLALAGITITEERKKAIEFSDGYYKSGLLVMVNANDNNIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTKDLRQFPNI DNAYMELGTKRADAVLHDTPNILYFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRVKVNGALKTLRDNGTYNEIYKK WFGTEPK
Sequences:
>Translated_247_residues MKSIFKVSLAALSLAFAVSSHAADKLVVATDTAFVPFEFKQGDKYVGFDIDLWAAIAKELKLDYTLKPMDFSGIIPALQT KNIDLALAGITITEERKKAIEFSDGYYKSGLLVMVNANDNNIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTKDLRQFPNI DNAYMELGTKRADAVLHDTPNILYFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRVKVNGALKTLRDNGTYNEIYKK WFGTEPK >Mature_247_residues MKSIFKVSLAALSLAFAVSSHAADKLVVATDTAFVPFEFKQGDKYVGFDIDLWAAIAKELKLDYTLKPMDFSGIIPALQT KNIDLALAGITITEERKKAIEFSDGYYKSGLLVMVNANDNNIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTKDLRQFPNI DNAYMELGTKRADAVLHDTPNILYFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRVKVNGALKTLRDNGTYNEIYKK WFGTEPK
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=89.5161290322581, Blast_Score=452, Evalue=1e-128, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=33.6322869955157, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1787088, Length=243, Percent_Identity=32.0987654320988, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=33.596837944664, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787085, Length=244, Percent_Identity=31.1475409836066, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=30.3964757709251, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27159; Mature: 27159
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIFKVSLAALSLAFAVSSHAADKLVVATDTAFVPFEFKQGDKYVGFDIDLWAAIAKEL CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEECCHHHHHHHHHHH KLDYTLKPMDFSGIIPALQTKNIDLALAGITITEERKKAIEFSDGYYKSGLLVMVNANDN CCCEEECCCCCCCCCCCEECCCCEEEEEEEEEECCHHHEEECCCCEECCCEEEEEECCCC NIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTKDLRQFPNIDNAYMELGTKRADAVLHDTP CCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHCCCHHCEEEECCC NILYFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRVKVNGALKTLRDNGTYNEIYKK CEEEEEEECCCCCHHHHHCCCCHHHCCEECCCCCCEEEEEECCCEEEHHCCCCHHHHHHH WFGTEPK HCCCCCC >Mature Secondary Structure MKSIFKVSLAALSLAFAVSSHAADKLVVATDTAFVPFEFKQGDKYVGFDIDLWAAIAKEL CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEECCHHHHHHHHHHH KLDYTLKPMDFSGIIPALQTKNIDLALAGITITEERKKAIEFSDGYYKSGLLVMVNANDN CCCEEECCCCCCCCCCCEECCCCEEEEEEEEEECCHHHEEECCCCEECCCEEEEEECCCC NIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTKDLRQFPNIDNAYMELGTKRADAVLHDTP CCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHCCCHHCEEEECCC NILYFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRVKVNGALKTLRDNGTYNEIYKK CEEEEEEECCCCCHHHHHCCCCHHHCCEECCCCCCEEEEEECCCEEEHHCCCCHHHHHHH WFGTEPK HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]