Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is ybbK [H]
Identifier: 157369680
GI number: 157369680
Start: 1570334
End: 1570834
Strand: Reverse
Name: ybbK [H]
Synonym: Spro_1437
Alternate gene names: 157369680
Gene position: 1570834-1570334 (Counterclockwise)
Preceding gene: 157369681
Following gene: 157369678
Centisome position: 28.83
GC content: 62.48
Gene sequence:
>501_bases ATGCCGTCAAAGATTTTATTCAGCGCCTGCCTGGCCGGTTTTAAAGTTCGCTACAACGCTTCCGACAAACCTTTGCTCAA CGCCACCTTGCTGCGCTGGCAGCGCGAAGGCCGCCTGGTGGTTTGCTGCCCGGAGCTGGCCGCCGGTTTTTCCACTCCAC GTCCCTCGGCAGAAATCACGCCAGCCGCTGAAGGCGCCACGGTACTGGCCCAACGGGCAAGAGTGATTGAAGTCAGCGGC GGTGACGTCACCGCCGGCTATCTGCTCGGCGCCCATCTGGCGCTGGAGACCGCACAACGGCACGACTGCCGCTTTGCGCT GCTCACCGACGGCAGCCCCTCCTGCGGCAGCCAGTTTATCTACGACGGCTCTTTCAGCGGCCAAACCAAGCCCGGCAGCG GCGTCACCGCCGAACTGCTGCGCCAGAATGGCATTGAAGTGTTTTCCGACCGTCAGATCGACGCGCTGATCGCCCGGATT GAAGCGGTGGAACAGACCTAG
Upstream 100 bases:
>100_bases TCGCCTGGCGCTGCCATCGGCGGGATGATTCTGCTATGTTAAAGCCGCGCGCGTGGGCCGCCTGCCCCACGCTTTCGCCA CTGTGACAGAGACAGACTTC
Downstream 100 bases:
>100_bases CGCTGCAGATGCTGCGCCAACCGTTGCTGCAGGTGCGAAATGCCCTGCGGATGCTGAATAAAGCGCTCGATGGCCATCAT CTGCCAGCGCTGCCCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPSKILFSACLAGFKVRYNASDKPLLNATLLRWQREGRLVVCCPELAAGFSTPRPSAEITPAAEGATVLAQRARVIEVSG GDVTAGYLLGAHLALETAQRHDCRFALLTDGSPSCGSQFIYDGSFSGQTKPGSGVTAELLRQNGIEVFSDRQIDALIARI EAVEQT
Sequences:
>Translated_166_residues MPSKILFSACLAGFKVRYNASDKPLLNATLLRWQREGRLVVCCPELAAGFSTPRPSAEITPAAEGATVLAQRARVIEVSG GDVTAGYLLGAHLALETAQRHDCRFALLTDGSPSCGSQFIYDGSFSGQTKPGSGVTAELLRQNGIEVFSDRQIDALIARI EAVEQT >Mature_165_residues PSKILFSACLAGFKVRYNASDKPLLNATLLRWQREGRLVVCCPELAAGFSTPRPSAEITPAAEGATVLAQRARVIEVSGG DVTAGYLLGAHLALETAQRHDCRFALLTDGSPSCGSQFIYDGSFSGQTKPGSGVTAELLRQNGIEVFSDRQIDALIARIE AVEQT
Specific function: Unknown
COG id: COG1683
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007553 [H]
Pfam domain/function: PF04463 DUF523 [H]
EC number: NA
Molecular weight: Translated: 17698; Mature: 17567
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKILFSACLAGFKVRYNASDKPLLNATLLRWQREGRLVVCCPELAAGFSTPRPSAEIT CCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCC PAAEGATVLAQRARVIEVSGGDVTAGYLLGAHLALETAQRHDCRFALLTDGSPSCGSQFI CCCCCHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE YDGSFSGQTKPGSGVTAELLRQNGIEVFSDRQIDALIARIEAVEQT ECCCCCCCCCCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure PSKILFSACLAGFKVRYNASDKPLLNATLLRWQREGRLVVCCPELAAGFSTPRPSAEIT CCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCC PAAEGATVLAQRARVIEVSGGDVTAGYLLGAHLALETAQRHDCRFALLTDGSPSCGSQFI CCCCCHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE YDGSFSGQTKPGSGVTAELLRQNGIEVFSDRQIDALIARIEAVEQT ECCCCCCCCCCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]