Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is ywbO [H]
Identifier: 157369417
GI number: 157369417
Start: 1291987
End: 1292706
Strand: Direct
Name: ywbO [H]
Synonym: Spro_1174
Alternate gene names: 157369417
Gene position: 1291987-1292706 (Clockwise)
Preceding gene: 157369416
Following gene: 157369418
Centisome position: 23.71
GC content: 47.08
Gene sequence:
>720_bases ATGAAGATTGATATTTGGTCAGATGTTATTTGTCCATTTTGCTATATCGGAAAACGCAAACTGGAAGCCGCTCTGGAGCA AACCGGCATTGAGGCGCAAATCGAGTGGCACAGTTTCGAGCTAAATCCAGATTCTCCTAGGTACTATGGGGTTCCATTGC AAGAATTAATGAGTCAGCTTTACCGAATCAGCCCGGATCGTGCTCTGGAGATTTTGAACCATGAAGAGCAGGAAGCTCGC CGTGTAGGGTTAGATTTCCAGTGGCGTATAGCGAAACCAGGCAACACATTTGATGCACACCGCCTCATTCATTTAGCCAA ACATTACGGGCTTCTTGAAAATGAGGTAAAAGAGCGTTTTCTTCGAGCCTATTTCACGGAAGGAAAAGATATTGGGGACC CGCAGATTCTTCGTGCCCTAGCAATCGAGACAGGTTTGCCTCCTCAAGAGATTGATGGGGTTTTGAGCAGCGACCGTTTC GCCGATGAGGTTCGCACCGACGAATTGGACGCACGCAACCGGGGGATTCGTGGCGTACCATACTTTGTGTTCAACGATCA GGCTAGCATATCAGGGGCGCGTGATGTCGAGGTATTTATTAATGTTTTACGCGAACAAGCAGATTTGCTGGCTATGCAAA CTGGCATAGATACAGGACCAGAGCCTGCATCGGAGGATGACGAAATGTGCAAAGACGGTTTTTGCGAAATAAAAAAATAA
Upstream 100 bases:
>100_bases TGCTTTTACGCGGAAAAAATATAGAGGCTTAGCCCGTTTACTCATATTTATTGCTGTAATCAATTAATAGATGCAGTCGC TGCTGCAAGGAGATACCAAG
Downstream 100 bases:
>100_bases TGATGCAAGCTCTTACCAATGAACACAGAGTATCCGCTCCAGAAGATTTTCCCTTCTCGGGCATTTGGAGATTGCAACCC GAGCTTTCGAATTATGAGTT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKIDIWSDVICPFCYIGKRKLEAALEQTGIEAQIEWHSFELNPDSPRYYGVPLQELMSQLYRISPDRALEILNHEEQEAR RVGLDFQWRIAKPGNTFDAHRLIHLAKHYGLLENEVKERFLRAYFTEGKDIGDPQILRALAIETGLPPQEIDGVLSSDRF ADEVRTDELDARNRGIRGVPYFVFNDQASISGARDVEVFINVLREQADLLAMQTGIDTGPEPASEDDEMCKDGFCEIKK
Sequences:
>Translated_239_residues MKIDIWSDVICPFCYIGKRKLEAALEQTGIEAQIEWHSFELNPDSPRYYGVPLQELMSQLYRISPDRALEILNHEEQEAR RVGLDFQWRIAKPGNTFDAHRLIHLAKHYGLLENEVKERFLRAYFTEGKDIGDPQILRALAIETGLPPQEIDGVLSSDRF ADEVRTDELDARNRGIRGVPYFVFNDQASISGARDVEVFINVLREQADLLAMQTGIDTGPEPASEDDEMCKDGFCEIKK >Mature_239_residues MKIDIWSDVICPFCYIGKRKLEAALEQTGIEAQIEWHSFELNPDSPRYYGVPLQELMSQLYRISPDRALEILNHEEQEAR RVGLDFQWRIAKPGNTFDAHRLIHLAKHYGLLENEVKERFLRAYFTEGKDIGDPQILRALAIETGLPPQEIDGVLSSDRF ADEVRTDELDARNRGIRGVPYFVFNDQASISGARDVEVFINVLREQADLLAMQTGIDTGPEPASEDDEMCKDGFCEIKK
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 27329; Mature: 27329
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDIWSDVICPFCYIGKRKLEAALEQTGIEAQIEWHSFELNPDSPRYYGVPLQELMSQL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEECCCHHHHHHHH YRISPDRALEILNHEEQEARRVGLDFQWRIAKPGNTFDAHRLIHLAKHYGLLENEVKERF HHCCHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LRAYFTEGKDIGDPQILRALAIETGLPPQEIDGVLSSDRFADEVRTDELDARNRGIRGVP HHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC YFVFNDQASISGARDVEVFINVLREQADLLAMQTGIDTGPEPASEDDEMCKDGFCEIKK EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MKIDIWSDVICPFCYIGKRKLEAALEQTGIEAQIEWHSFELNPDSPRYYGVPLQELMSQL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEECCCHHHHHHHH YRISPDRALEILNHEEQEARRVGLDFQWRIAKPGNTFDAHRLIHLAKHYGLLENEVKERF HHCCHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LRAYFTEGKDIGDPQILRALAIETGLPPQEIDGVLSSDRFADEVRTDELDARNRGIRGVP HHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC YFVFNDQASISGARDVEVFINVLREQADLLAMQTGIDTGPEPASEDDEMCKDGFCEIKK EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]