Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is hemH
Identifier: 157369386
GI number: 157369386
Start: 1258641
End: 1259603
Strand: Direct
Name: hemH
Synonym: Spro_1143
Alternate gene names: 157369386
Gene position: 1258641-1259603 (Clockwise)
Preceding gene: 157369385
Following gene: 157369387
Centisome position: 23.1
GC content: 59.29
Gene sequence:
>963_bases ATGAAGCAAGAGAAACACGGAGTATTGCTGGTGAACCTGGGCACGCCGGATGCTCCGACCTCGTCGGCGGTAAAACGCTA TCTAAAGGAATTCCTCAGTGACGACCGCGTGGTGGATACGGCCCCGCTGATTTGGTGGCCGATCCTCAACGGCGCCATCT TGCCGATCCGTTCACCGCGGGTCGCCAAGTTGTATCAGTCGGTATGGATGGACGAAGGTTCTCCGTTGCTGGTTTACAGC CGCCGCCAGCAGCGCGCGTTGGCCGCACGTATGCCCAACACGCCGGTTGAACTGGGTATGAGCTACGGCTCCCCAAGCCT GGCCGAAGCGATTGACAAGCTGCTGGCGCAAGGCGTGACCAATCTGGTGGTGTTGCCGCTGTACCCGCAATACTCCTGCT CGACCAGCGCCGCGGTATGGGACGGAGTGGCCCGGATACTGAAAGGCTACCGTCGCCTGCCGTCAGTCAGCTTTATCCGC GACTATGCCGAGCACCCGGCCTACATTGCCGCGCTGCGCCAAAGTGTTGAGCATTCGTTTGCCGAGCATGGTCAGCCGGA TCGGCTGGTGTTGTCATTCCATGGCATTCCCAAGCGCTATGCGCGTCTGGGCGACGATTATCCGCAGCGTTGCGAGGACA CGTTACGTGCCCTGACGGCGACGTTACCGCTGGCACCGGAGCGGGTGATGATGACTTATCAGTCGCGCTTTGGTCGTGAG CCCTGGCTGACGCCTTATACCGACGAGACCCTCAAAGGCCTGCCGGCTCAGGGTGTTAAACATATTCAGCTTATCTGCCC CGGTTTCTCTGCGGACTGCCTGGAAACGCTGGAGGAGATCAAAGAGCAAAACCGCGAGATCTTCCTTAAGGCCGGCGGTG AGAAGTTCGAGTACATTTCAGCGCTCAACGACGAGCCGGCGCACATTGATATGATGCAGCAACTGGTGGCACAGCGCTTC TGA
Upstream 100 bases:
>100_bases CCGATGAGGCGCTTTTCCGTTACAATAGGCTCCATTAATTGACGTTAACCCCCTGACCCAGAACGGGGGGTTAGCTTGCA AGGAACCAAGGGGAACTGAG
Downstream 100 bases:
>100_bases TCCTCAGAACGCAAAATGGTGACGGCCATCATCAATCGGGCAGGAATGTGCTAACATTCTCTGCCTGTTAACTGCCACTG CCGCCAATTAAATGAAATTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKQEKHGVLLVNLGTPDAPTSSAVKRYLKEFLSDDRVVDTAPLIWWPILNGAILPIRSPRVAKLYQSVWMDEGSPLLVYS RRQQRALAARMPNTPVELGMSYGSPSLAEAIDKLLAQGVTNLVVLPLYPQYSCSTSAAVWDGVARILKGYRRLPSVSFIR DYAEHPAYIAALRQSVEHSFAEHGQPDRLVLSFHGIPKRYARLGDDYPQRCEDTLRALTATLPLAPERVMMTYQSRFGRE PWLTPYTDETLKGLPAQGVKHIQLICPGFSADCLETLEEIKEQNREIFLKAGGEKFEYISALNDEPAHIDMMQQLVAQRF
Sequences:
>Translated_320_residues MKQEKHGVLLVNLGTPDAPTSSAVKRYLKEFLSDDRVVDTAPLIWWPILNGAILPIRSPRVAKLYQSVWMDEGSPLLVYS RRQQRALAARMPNTPVELGMSYGSPSLAEAIDKLLAQGVTNLVVLPLYPQYSCSTSAAVWDGVARILKGYRRLPSVSFIR DYAEHPAYIAALRQSVEHSFAEHGQPDRLVLSFHGIPKRYARLGDDYPQRCEDTLRALTATLPLAPERVMMTYQSRFGRE PWLTPYTDETLKGLPAQGVKHIQLICPGFSADCLETLEEIKEQNREIFLKAGGEKFEYISALNDEPAHIDMMQQLVAQRF >Mature_320_residues MKQEKHGVLLVNLGTPDAPTSSAVKRYLKEFLSDDRVVDTAPLIWWPILNGAILPIRSPRVAKLYQSVWMDEGSPLLVYS RRQQRALAARMPNTPVELGMSYGSPSLAEAIDKLLAQGVTNLVVLPLYPQYSCSTSAAVWDGVARILKGYRRLPSVSFIR DYAEHPAYIAALRQSVEHSFAEHGQPDRLVLSFHGIPKRYARLGDDYPQRCEDTLRALTATLPLAPERVMMTYQSRFGRE PWLTPYTDETLKGLPAQGVKHIQLICPGFSADCLETLEEIKEQNREIFLKAGGEKFEYISALNDEPAHIDMMQQLVAQRF
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=334, Percent_Identity=26.3473053892216, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI60499021, Length=333, Percent_Identity=26.4264264264264, Blast_Score=105, Evalue=5e-23, Organism=Escherichia coli, GI1786681, Length=317, Percent_Identity=69.4006309148265, Blast_Score=447, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6324750, Length=334, Percent_Identity=26.0479041916168, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI17864156, Length=343, Percent_Identity=26.2390670553936, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24651774, Length=274, Percent_Identity=24.8175182481752, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45552018, Length=183, Percent_Identity=27.8688524590164, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_SERP5 (A8GAV7)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477375.1 - ProteinModelPortal: A8GAV7 - SMR: A8GAV7 - STRING: A8GAV7 - GeneID: 5605801 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1143 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: TIEEIGM - ProtClustDB: PRK00035 - BioCyc: SPRO399741:SPRO_1143-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 36041; Mature: 36041
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEKHGVLLVNLGTPDAPTSSAVKRYLKEFLSDDRVVDTAPLIWWPILNGAILPIRSPR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCEEECCCCCH VAKLYQSVWMDEGSPLLVYSRRQQRALAARMPNTPVELGMSYGSPSLAEAIDKLLAQGVT HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCHH NLVVLPLYPQYSCSTSAAVWDGVARILKGYRRLPSVSFIRDYAEHPAYIAALRQSVEHSF HEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHH AEHGQPDRLVLSFHGIPKRYARLGDDYPQRCEDTLRALTATLPLAPERVMMTYQSRFGRE HHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC PWLTPYTDETLKGLPAQGVKHIQLICPGFSADCLETLEEIKEQNREIFLKAGGEKFEYIS CCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHH ALNDEPAHIDMMQQLVAQRF HCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKQEKHGVLLVNLGTPDAPTSSAVKRYLKEFLSDDRVVDTAPLIWWPILNGAILPIRSPR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCEEECCCCCH VAKLYQSVWMDEGSPLLVYSRRQQRALAARMPNTPVELGMSYGSPSLAEAIDKLLAQGVT HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCHH NLVVLPLYPQYSCSTSAAVWDGVARILKGYRRLPSVSFIRDYAEHPAYIAALRQSVEHSF HEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHH AEHGQPDRLVLSFHGIPKRYARLGDDYPQRCEDTLRALTATLPLAPERVMMTYQSRFGRE HHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC PWLTPYTDETLKGLPAQGVKHIQLICPGFSADCLETLEEIKEQNREIFLKAGGEKFEYIS CCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHH ALNDEPAHIDMMQQLVAQRF HCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA