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The map label for this gene is yajR [H]

Identifier: 157369328

GI number: 157369328

Start: 1192878

End: 1194242

Strand: Reverse

Name: yajR [H]

Synonym: Spro_1085

Alternate gene names: 157369328

Gene position: 1194242-1192878 (Counterclockwise)

Preceding gene: 157369329

Following gene: 157369326

Centisome position: 21.92

GC content: 58.32

Gene sequence:

>1365_bases
ATGAACGATAATGCAATGACCCCGCAGGAGAGACGAGCGACCTGGGGATTAGGCACGGTATTCTCACTGCGCATGCTGGG
CATGTTTATGGTGTTGCCGGTACTGACCACCTACGGTATGGCGTTGAACGGTGCCAGCGAAACGCTGATCGGTATCGCCA
TCGGTATTTATGGCCTGGCGCAGGCGGTGTTTCAGATCCCCTTCGGCCTGATATCCGATCGTATCGGCCGTAAACCGTTG
ATTGTCGGCGGGCTGCTGATCTTTGCGCTGGGCAGTGTCATTGCCGCCGCGACCGACTCCATCTGGGGGGTGATCCTCGG
CCGGGCATTACAGGGCTCCGGCGCTATCGCCGCGGCAGTGATGGCACTGCTGTCAGACCTGACCCGGGAACAGAATCGTA
CCAAGGCAATGGCGTTTATCGGCGTCAGCTTCGGTATTACCTTCGCTATTGCCATGGTGGTCGGCCCGATCGTTACCCAC
GCCTTTGGCCTGCATGCGCTGTTTTGGATGATTGCCGTGCTGGCATTAGCCGGCATCGTGATCACTCTGGCGGTGGTTCC
TTCGGCCAGCCACCACGTGCTGAACCGGGAATCGAGCATCGTACGCGGCAGCTTCAGCAAGGTGCTGAGCAACTCCCGGC
TGTTGAAGCTCAATTTCGGCATCATGTGTCTGCATATCCTGCTGATGTCCAGCTTCGTGGCGCTGCCACTGGCGATGGAA
AAAGCCGGCCTGGCGCCGAGCGAACACTGGATTGTCTATCTGGTCACCATGCTGGTTTCTTTTGCTGCCGTGGTGCCCTT
TATCATTTATGCCGAGAAGAAGCGCCGCATGAAGCAGGTCTTTATGGGTTGCGTAGCGGTGTTGTTCTGCGCGGAAGTGC
TGCTGTGGCTGTCCGGCGCGCACCTGTGGGGCATCATTGCCGGCGTGCAGCTGTTCTTTATGGCGTTTAACGTCATGGAA
GCCATTCTGCCTTCGCTGATCAGCAAAGAGTCTCCGGCCGGCTACAAGGGTACGGCGATGGGGGTTTACTCCACCAGCCA
GTTTATTGGCGTGGCGATCGGTGGCAGCCTGGGTGGCTTGCTGTATGGCCTGCAGGGTGCGGGGCTGGTGTTTATCGCCG
GGGCGGTGTTGGCGGCAATCTGGTTTTTGGTCAGCAGTACCATGCAAGAACCGCCTTACGTCAGCAGCCTGCGTATTACG
CTGTCGGAACTGGCCGTGAAGGATTCGGCACTGGAAAGCCGCCTGAAAGCCCAACCGGGCGTGGCGGAAGCGATAGTGGT
GCCGGAAGAGCGCAGCGCCTACGTGAAGGTCGATACCAAACAAACCAACCGAGTCCAATTGGAAGCGCTGGTGAATTCAC
TGTAA

Upstream 100 bases:

>100_bases
CCCCCTGCCCTTCACACTAAAATGACGCTTCTTTCACAGAAGCTATCCCCTCAGGCGTTATCACCGATAACCTGACGGAA
TGGCTTTTAATGAGGTTTTA

Downstream 100 bases:

>100_bases
AGAAAAGGGCCAGCAAGCTGGCCCTTCAGACGGCTGACAAAGCCCATTATTAGGGAGAGCGTGCCGAAGGGGTCGTAGCG
GCTTGCCCGCCGGATTGCCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNDNAMTPQERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLAQAVFQIPFGLISDRIGRKPL
IVGGLLIFALGSVIAAATDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVVGPIVTH
AFGLHALFWMIAVLALAGIVITLAVVPSASHHVLNRESSIVRGSFSKVLSNSRLLKLNFGIMCLHILLMSSFVALPLAME
KAGLAPSEHWIVYLVTMLVSFAAVVPFIIYAEKKRRMKQVFMGCVAVLFCAEVLLWLSGAHLWGIIAGVQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVAIGGSLGGLLYGLQGAGLVFIAGAVLAAIWFLVSSTMQEPPYVSSLRIT
LSELAVKDSALESRLKAQPGVAEAIVVPEERSAYVKVDTKQTNRVQLEALVNSL

Sequences:

>Translated_454_residues
MNDNAMTPQERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLAQAVFQIPFGLISDRIGRKPL
IVGGLLIFALGSVIAAATDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVVGPIVTH
AFGLHALFWMIAVLALAGIVITLAVVPSASHHVLNRESSIVRGSFSKVLSNSRLLKLNFGIMCLHILLMSSFVALPLAME
KAGLAPSEHWIVYLVTMLVSFAAVVPFIIYAEKKRRMKQVFMGCVAVLFCAEVLLWLSGAHLWGIIAGVQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVAIGGSLGGLLYGLQGAGLVFIAGAVLAAIWFLVSSTMQEPPYVSSLRIT
LSELAVKDSALESRLKAQPGVAEAIVVPEERSAYVKVDTKQTNRVQLEALVNSL
>Mature_454_residues
MNDNAMTPQERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLAQAVFQIPFGLISDRIGRKPL
IVGGLLIFALGSVIAAATDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVVGPIVTH
AFGLHALFWMIAVLALAGIVITLAVVPSASHHVLNRESSIVRGSFSKVLSNSRLLKLNFGIMCLHILLMSSFVALPLAME
KAGLAPSEHWIVYLVTMLVSFAAVVPFIIYAEKKRRMKQVFMGCVAVLFCAEVLLWLSGAHLWGIIAGVQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVAIGGSLGGLLYGLQGAGLVFIAGAVLAAIWFLVSSTMQEPPYVSSLRIT
LSELAVKDSALESRLKAQPGVAEAIVVPEERSAYVKVDTKQTNRVQLEALVNSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=448, Percent_Identity=73.2142857142857, Blast_Score=666, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48311; Mature: 48311

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNAMTPQERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLA
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAVFQIPFGLISDRIGRKPLIVGGLLIFALGSVIAAATDSIWGVILGRALQGSGAIAAAV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVVGPIVTHAFGLHALFWMIAVLALAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLAVVPSASHHVLNRESSIVRGSFSKVLSNSRLLKLNFGIMCLHILLMSSFVALPLAME
HHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
KAGLAPSEHWIVYLVTMLVSFAAVVPFIIYAEKKRRMKQVFMGCVAVLFCAEVLLWLSGA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HLWGIIAGVQLFFMAFNVMEAILPSLISKESPAGYKGTAMGVYSTSQFIGVAIGGSLGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHEEECCHHHHH
LYGLQGAGLVFIAGAVLAAIWFLVSSTMQEPPYVSSLRITLSELAVKDSALESRLKAQPG
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAEAIVVPEERSAYVKVDTKQTNRVQLEALVNSL
CCEEEEECCCCCCEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNDNAMTPQERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLA
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAVFQIPFGLISDRIGRKPLIVGGLLIFALGSVIAAATDSIWGVILGRALQGSGAIAAAV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVVGPIVTHAFGLHALFWMIAVLALAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLAVVPSASHHVLNRESSIVRGSFSKVLSNSRLLKLNFGIMCLHILLMSSFVALPLAME
HHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
KAGLAPSEHWIVYLVTMLVSFAAVVPFIIYAEKKRRMKQVFMGCVAVLFCAEVLLWLSGA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HLWGIIAGVQLFFMAFNVMEAILPSLISKESPAGYKGTAMGVYSTSQFIGVAIGGSLGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHEEECCHHHHH
LYGLQGAGLVFIAGAVLAAIWFLVSSTMQEPPYVSSLRITLSELAVKDSALESRLKAQPG
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAEAIVVPEERSAYVKVDTKQTNRVQLEALVNSL
CCEEEEECCCCCCEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]