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The map label for this gene is secF [H]

Identifier: 157369307

GI number: 157369307

Start: 1171290

End: 1172258

Strand: Direct

Name: secF [H]

Synonym: Spro_1064

Alternate gene names: 157369307

Gene position: 1171290-1172258 (Clockwise)

Preceding gene: 157369306

Following gene: 157369310

Centisome position: 21.5

GC content: 55.01

Gene sequence:

>969_bases
GTGGCACAGGATTATACTGTTGAACAACTCAACTACGGCCGTAAAGTCTATGACTTTATGCGCTGGGATTACGTGGCCTT
CGGCATCTCGCTGTTGCTGCTGATCGCGTCAATCGCCATTATGTCGGTGCGTGGTTTTAACTGGGGTCTGGACTTCACTG
GCGGTACCGTCATTGAAATCAGCCTGGAACAACCGGCCAACCTCGATCTGATGCGCGATACGCTGGAAAAAGCCGGGTTC
CAGGACCCGATTATTCAGAACTTTGGCAGCAGCCGTGACGTGATGGTGCGTATGCCACCGGCGATCGGCACCGCAGGCCA
GGAACTGGGTAACAAAGTCATCAGCGTGATTAACGACTCGGTCGATAAAAACGCCACGGTGAAGAGGATTGAGTTCGTCG
GCCCGAGTGTGGGCACCGAACTGGCGCAAAACGGCGGCATGGCGCTGCTGGTAGCGCTGATCTGTATTCTGATTTACGTC
GGTTTCCGCTTCGAATGGCGCCTGGCGCTGGGGGCGGTTATCGCGTTGGCGCACGACGTGGTCATCACTCTGGGCGTGCT
GTCGTTGTTCCATATCGAGATTGACCTGACCATCGTCGCATCATTGATGTCGGTTATCGGTTACTCGTTGAACGACAGCA
TCGTGGTTTCCGACCGTATTCGTGAGAACTTCCGCAAGATCCGTCGCGGCACGCCTTACGAAATCATGAACGTGTCGTTG
ACCCAGACGCTGAGCCGTACCTTGATGACCTCCGGTACCACCCTGATGGTGGTTCTGATGCTGTACATCTTCGGCGGCGC
GATGCTGCACGGCTTCTCTCTGGCTATGCTGATTGGTGTGTCTATCGGTACCATATCCTCTATCTACGTGGCGTCCGCGC
TGGCGTTGAAACTGGGTATGAAACGCGAACACATGCTGCAGCAGAAAGTGGAAAAAGAGGGCGCAGATCAGCCTTCGATT
ATGCCGTGA

Upstream 100 bases:

>100_bases
GCGACGTCCATGTTCACCGCGATTGTCGGTACCCGTGCCATCGTCAACCTGCTTTACGGCGGCAAACGCATTAACAAGCT
GTCTATCTGAGGAGTGCGTT

Downstream 100 bases:

>100_bases
TTTGCCCGTGAGTTGAAATACGATGCCGGTCGGCTTATTCCGACCGGCATTTTTTTTGCCTACAGGCGGCTGACTCCACT
CTCTGAGGGTTCGGTTAACG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAQDYTVEQLNYGRKVYDFMRWDYVAFGISLLLLIASIAIMSVRGFNWGLDFTGGTVIEISLEQPANLDLMRDTLEKAGF
QDPIIQNFGSSRDVMVRMPPAIGTAGQELGNKVISVINDSVDKNATVKRIEFVGPSVGTELAQNGGMALLVALICILIYV
GFRFEWRLALGAVIALAHDVVITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIMNVSL
TQTLSRTLMTSGTTLMVVLMLYIFGGAMLHGFSLAMLIGVSIGTISSIYVASALALKLGMKREHMLQQKVEKEGADQPSI
MP

Sequences:

>Translated_322_residues
MAQDYTVEQLNYGRKVYDFMRWDYVAFGISLLLLIASIAIMSVRGFNWGLDFTGGTVIEISLEQPANLDLMRDTLEKAGF
QDPIIQNFGSSRDVMVRMPPAIGTAGQELGNKVISVINDSVDKNATVKRIEFVGPSVGTELAQNGGMALLVALICILIYV
GFRFEWRLALGAVIALAHDVVITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIMNVSL
TQTLSRTLMTSGTTLMVVLMLYIFGGAMLHGFSLAMLIGVSIGTISSIYVASALALKLGMKREHMLQQKVEKEGADQPSI
MP
>Mature_321_residues
AQDYTVEQLNYGRKVYDFMRWDYVAFGISLLLLIASIAIMSVRGFNWGLDFTGGTVIEISLEQPANLDLMRDTLEKAGFQ
DPIIQNFGSSRDVMVRMPPAIGTAGQELGNKVISVINDSVDKNATVKRIEFVGPSVGTELAQNGGMALLVALICILIYVG
FRFEWRLALGAVIALAHDVVITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIMNVSLT
QTLSRTLMTSGTTLMVVLMLYIFGGAMLHGFSLAMLIGVSIGTISSIYVASALALKLGMKREHMLQQKVEKEGADQPSIM
P

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=323, Percent_Identity=82.3529411764706, Blast_Score=550, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35321; Mature: 35190

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDYTVEQLNYGRKVYDFMRWDYVAFGISLLLLIASIAIMSVRGFNWGLDFTGGTVIEI
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEE
SLEQPANLDLMRDTLEKAGFQDPIIQNFGSSRDVMVRMPPAIGTAGQELGNKVISVINDS
ECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
VDKNATVKRIEFVGPSVGTELAQNGGMALLVALICILIYVGFRFEWRLALGAVIALAHDV
CCCCCHHHHEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIMNVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCHHEEHHHH
TQTLSRTLMTSGTTLMVVLMLYIFGGAMLHGFSLAMLIGVSIGTISSIYVASALALKLGM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KREHMLQQKVEKEGADQPSIMP
CHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AQDYTVEQLNYGRKVYDFMRWDYVAFGISLLLLIASIAIMSVRGFNWGLDFTGGTVIEI
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEE
SLEQPANLDLMRDTLEKAGFQDPIIQNFGSSRDVMVRMPPAIGTAGQELGNKVISVINDS
ECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
VDKNATVKRIEFVGPSVGTELAQNGGMALLVALICILIYVGFRFEWRLALGAVIALAHDV
CCCCCHHHHEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIMNVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCHHEEHHHH
TQTLSRTLMTSGTTLMVVLMLYIFGGAMLHGFSLAMLIGVSIGTISSIYVASALALKLGM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KREHMLQQKVEKEGADQPSIMP
CHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]