| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369266
Identifier: 157369266
GI number: 157369266
Start: 1122935
End: 1124509
Strand: Direct
Name: 157369266
Synonym: Spro_1023
Alternate gene names: NA
Gene position: 1122935-1124509 (Clockwise)
Preceding gene: 157369265
Following gene: 157369267
Centisome position: 20.61
GC content: 58.67
Gene sequence:
>1575_bases ATGAAAACTATGAAACCAAAAAGCAGCATAAATCCTTTGAAAGATATCGGTACTCTGCTGGTGATGGTGCTGCTGTCCAT CGTCGGCGCAATTATCGGCGTACAGTTGATCACCACGCTGGGCGTGACGCCCAACACGTCGATTATTGGCGCGTTGATCG CCATGCTGTTGGCGCGCATTCCACTGCAAATGTTCCAGCGTTACCGTTCGGTGCATACGCAAAATCTGGCGCAAACGGTG ATCTCTTCCGCCACTTTCGGCGCGGCCAACTCGCTGCTGATGCCAATTGCCGTGCCTTATGTGATGGGGCAACCGCAGCT AATCCTGCCGATGTTTTGCGGGGTGGCGGCCGCGATGTTGCTCGACGCCTACCTGCTGTACCGCATGTTCGACACCAAAA TCTTTCCTGCGGCCAATGCCTGGCCACCGGGTGTCGCGGCGGCGGAAGCCATTAAGGCCGGTGACCGGGGTGGCAAGCAA GCCTGGCTGCTGGTGGTGGGCGTGGTAGTCGGCATCGCCGGTTCGATGCTTAAAATCCCGATGGCGGCGTTCGGCACCGC GTTTATCGGCAATATCTGGGCTTTGGGCATGTTTGGTGTCGGCCTGTTGCTGCGAGCCTACGCGGAACCCATGGCAGGCT TCGATATCAATGCGAATTTCATTCCTCACGGAGTGATGGTTGGTGCCGGACTGGTGGCGTTGATCCAGGTGGTTCAGGTG ATCCGCAGCAAGCGTGCGGATACCAGTGGTTATAGCCAGGCCGACAGTGAAGTGCGCAAAGCGCTCGGGTTGGGCGCGGT GGGATATATCGTTATTGCCGCGCTGTTGGCGTTGGCCGCTGGACTGTACAGCGAGATGTCGCTGGGCATGCTGGTGCTGT TTGTGATTTACGCCGCGTTTGCCGCCTTTGTGCATGAACTGATCGTCGGCATCGCCGCGATGCATTCCGGCTGGTTCCCG GCCTTTGCGGTGGCGCTGATTACCCTGATTATCGGCATCCTGATTGGTTTCCCGCCGCTGGCGCTGTGCGTGCTGACCGG GTTTACCGCCGCCACCGGCCCGGCGTTTGCCGATATGGGCTTTGATCTGAAAGCCGGCTTCATTCTGCGCGGCTACGGCA AAGATTTACAGCAGGAGCTGCTGGGGCGCCGCATTCAGTTGTTTGCTGCGCTGATCGCCTTTGTCATCGCCATCCCGGTG GTGTACTTCGCTTATACCAGTTACTTCCTGCAGGACCTGATCCCGCCGGTGGCGCGGGTGTACGCCAAAACCATCGAGGC AGGTGCGCAGCCGGGCATTGCCTACAGCCTGCTTATCTGGGCTGTCCCAGGTGCCATTGTGCAGTGGATTGGCGGGCCAA AACGTCAGCTCGGCGTGCTGTTGGCCACCGGCCTGTTGATCAACAACGCGTTGGCGGGTTGGGCGGTGATCGTCGGTATC GCGCTGCGCATCCTGATTATTCGCCGCTGGGGCGACAAGGGCCGCACGCCGATGGAGATCATGGCGGCCGGTTTTATCGC CGGAGACGCGCTGTATAACTTTTTCAATTCCATTTTTTCCAGCAAAGGGAAATAG
Upstream 100 bases:
>100_bases AATAAATACTTAATGGCACTCACAGTTCCAATATTCGGAACTGTGAGTGCCGCCTCATGCCGAAATTAACGTTGCCAGAC GCCAGGGAATATTCAGGGAA
Downstream 100 bases:
>100_bases CCCATCCGGTTAAATTGTGAGGTCAGCCGATTATGAGTTTGCAACAAACGCTGCAGGTTTTTGAATTAATTGATAGTGCC TATGTGAACGGTCAGCAGGT
Product: oligopeptide transporter OPT superfamily protein
Products: NA
Alternate protein names: Oligopeptide Transporter
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MKTMKPKSSINPLKDIGTLLVMVLLSIVGAIIGVQLITTLGVTPNTSIIGALIAMLLARIPLQMFQRYRSVHTQNLAQTV ISSATFGAANSLLMPIAVPYVMGQPQLILPMFCGVAAAMLLDAYLLYRMFDTKIFPAANAWPPGVAAAEAIKAGDRGGKQ AWLLVVGVVVGIAGSMLKIPMAAFGTAFIGNIWALGMFGVGLLLRAYAEPMAGFDINANFIPHGVMVGAGLVALIQVVQV IRSKRADTSGYSQADSEVRKALGLGAVGYIVIAALLALAAGLYSEMSLGMLVLFVIYAAFAAFVHELIVGIAAMHSGWFP AFAVALITLIIGILIGFPPLALCVLTGFTAATGPAFADMGFDLKAGFILRGYGKDLQQELLGRRIQLFAALIAFVIAIPV VYFAYTSYFLQDLIPPVARVYAKTIEAGAQPGIAYSLLIWAVPGAIVQWIGGPKRQLGVLLATGLLINNALAGWAVIVGI ALRILIIRRWGDKGRTPMEIMAAGFIAGDALYNFFNSIFSSKGK
Sequences:
>Translated_524_residues MKTMKPKSSINPLKDIGTLLVMVLLSIVGAIIGVQLITTLGVTPNTSIIGALIAMLLARIPLQMFQRYRSVHTQNLAQTV ISSATFGAANSLLMPIAVPYVMGQPQLILPMFCGVAAAMLLDAYLLYRMFDTKIFPAANAWPPGVAAAEAIKAGDRGGKQ AWLLVVGVVVGIAGSMLKIPMAAFGTAFIGNIWALGMFGVGLLLRAYAEPMAGFDINANFIPHGVMVGAGLVALIQVVQV IRSKRADTSGYSQADSEVRKALGLGAVGYIVIAALLALAAGLYSEMSLGMLVLFVIYAAFAAFVHELIVGIAAMHSGWFP AFAVALITLIIGILIGFPPLALCVLTGFTAATGPAFADMGFDLKAGFILRGYGKDLQQELLGRRIQLFAALIAFVIAIPV VYFAYTSYFLQDLIPPVARVYAKTIEAGAQPGIAYSLLIWAVPGAIVQWIGGPKRQLGVLLATGLLINNALAGWAVIVGI ALRILIIRRWGDKGRTPMEIMAAGFIAGDALYNFFNSIFSSKGK >Mature_524_residues MKTMKPKSSINPLKDIGTLLVMVLLSIVGAIIGVQLITTLGVTPNTSIIGALIAMLLARIPLQMFQRYRSVHTQNLAQTV ISSATFGAANSLLMPIAVPYVMGQPQLILPMFCGVAAAMLLDAYLLYRMFDTKIFPAANAWPPGVAAAEAIKAGDRGGKQ AWLLVVGVVVGIAGSMLKIPMAAFGTAFIGNIWALGMFGVGLLLRAYAEPMAGFDINANFIPHGVMVGAGLVALIQVVQV IRSKRADTSGYSQADSEVRKALGLGAVGYIVIAALLALAAGLYSEMSLGMLVLFVIYAAFAAFVHELIVGIAAMHSGWFP AFAVALITLIIGILIGFPPLALCVLTGFTAATGPAFADMGFDLKAGFILRGYGKDLQQELLGRRIQLFAALIAFVIAIPV VYFAYTSYFLQDLIPPVARVYAKTIEAGAQPGIAYSLLIWAVPGAIVQWIGGPKRQLGVLLATGLLINNALAGWAVIVGI ALRILIIRRWGDKGRTPMEIMAAGFIAGDALYNFFNSIFSSKGK
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55422; Mature: 55422
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMKPKSSINPLKDIGTLLVMVLLSIVGAIIGVQLITTLGVTPNTSIIGALIAMLLARI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PLQMFQRYRSVHTQNLAQTVISSATFGAANSLLMPIAVPYVMGQPQLILPMFCGVAAAML HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LDAYLLYRMFDTKIFPAANAWPPGVAAAEAIKAGDRGGKQAWLLVVGVVVGIAGSMLKIP HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH MAAFGTAFIGNIWALGMFGVGLLLRAYAEPMAGFDINANFIPHGVMVGAGLVALIQVVQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IRSKRADTSGYSQADSEVRKALGLGAVGYIVIAALLALAAGLYSEMSLGMLVLFVIYAAF HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFVHELIVGIAAMHSGWFPAFAVALITLIIGILIGFPPLALCVLTGFTAATGPAFADMG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCHHHHCC FDLKAGFILRGYGKDLQQELLGRRIQLFAALIAFVIAIPVVYFAYTSYFLQDLIPPVARV CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAKTIEAGAQPGIAYSLLIWAVPGAIVQWIGGPKRQLGVLLATGLLINNALAGWAVIVGI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRILIIRRWGDKGRTPMEIMAAGFIAGDALYNFFNSIFSSKGK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTMKPKSSINPLKDIGTLLVMVLLSIVGAIIGVQLITTLGVTPNTSIIGALIAMLLARI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PLQMFQRYRSVHTQNLAQTVISSATFGAANSLLMPIAVPYVMGQPQLILPMFCGVAAAML HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LDAYLLYRMFDTKIFPAANAWPPGVAAAEAIKAGDRGGKQAWLLVVGVVVGIAGSMLKIP HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH MAAFGTAFIGNIWALGMFGVGLLLRAYAEPMAGFDINANFIPHGVMVGAGLVALIQVVQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IRSKRADTSGYSQADSEVRKALGLGAVGYIVIAALLALAAGLYSEMSLGMLVLFVIYAAF HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFVHELIVGIAAMHSGWFPAFAVALITLIIGILIGFPPLALCVLTGFTAATGPAFADMG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCHHHHCC FDLKAGFILRGYGKDLQQELLGRRIQLFAALIAFVIAIPVVYFAYTSYFLQDLIPPVARV CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAKTIEAGAQPGIAYSLLIWAVPGAIVQWIGGPKRQLGVLLATGLLINNALAGWAVIVGI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRILIIRRWGDKGRTPMEIMAAGFIAGDALYNFFNSIFSSKGK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA