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The map label for this gene is yadT [C]

Identifier: 157369258

GI number: 157369258

Start: 1115646

End: 1116761

Strand: Direct

Name: yadT [C]

Synonym: Spro_1015

Alternate gene names: 157369258

Gene position: 1115646-1116761 (Clockwise)

Preceding gene: 157369256

Following gene: 157369259

Centisome position: 20.47

GC content: 54.3

Gene sequence:

>1116_bases
ATGCGCAATTCCCTCATTTTTCTGCTGCTTTCCCTGCTGTTCGGCTTTTTTGGCGTTCAGGCAAAAATGGTCACTGACAT
TACGGGGCGTCAGGTTGAGGTGCCGGACAATCCGCAGCGTATTGTGCTGGGCGAGAGCCGCATGTTGTATACCCTGGCGC
TGCTCGAACCGGGAAACCCCGCCCAACGTATCGTTGGCTGGCCGGAAGATATGGCGCGTTTCGATGCGCAAAGCTGGCAA
CTCTACACGCAGAAATTTCCGCAGATCAAAGCGATCCCCTCTATCAGCAAGGGCAATTTCCGCCAGGTAAATATTGAAAA
CCTGATCCGCTTGAAGCCGGACTTAGTGATCCTCGCGCGCTATGCGCGGGAAGAGGGTGACAGTGATTTATTGCTGAGTG
CGTTGAGCAAGGCCGGCATTGCGGTGATCTACGTCGATTTACGGGTCGATCTGCTGAACAACACCGTGCCTAGCGTCCGC
CTGTTGGGCGAAGTGCTTAACCGTCAGCCGCGCGCAGAGCAGTTCATCAACTTCTATCAACAGCATATGGCGGTGATCCA
GCAGCGGCTGGCCGGTTATCAGGGGCCGAAACCCAAGGTGATGTTGCACCTGCACCTCGGGCGGCGCGAAACCTGCTGCA
CCACGGCGGCCCATGGCAACCTCGGTGACTTGCTGACCTTTGCCGGCGGCGACAATATTGCCAACGCCAGCATCAAAGGC
GTCTACGGTGAGCTGAACCCGGAAACCATTCTGACCGCCAATCCTGACATCTACATCGCCACCGGCATGGCCGGGCCGCA
GGGCAAGCATTTTTCCGATCTGCGTCTTGGGCCGCTGGTCACCCAGCAGGAAGCCGATGAGAGCTTTAGCCGGGTGATGC
AAAAACAACCGATGCTCGCCAACCTGAAAGCCATAAAAAATCACCAGGCCTGGAGCATTTGGCACAACTTTTATCTCAGC
CCTTATCACGTTGTCGCGGTTGAGATGTTCGCCAAAACCTTATATCCGGATCTGTTTGCAGACATCAACCCGCAGCAGAC
CTTTAAGCAGTTATATCAACAATTTTTGCCGTTACCTTTTTCAGGGACCTATTGGAGTCAGTTAAATAATGAATAA

Upstream 100 bases:

>100_bases
CGTAATTCAGCGGATTTGACTCGCTCTTTGCCTGTTGTGATTGAAAGTGCTAATGAGAGTGATTATCATGCGCGAATATT
TTGGCTAATCCGGCTCACTG

Downstream 100 bases:

>100_bases
CACCCAACGTGGCTGGTGGTGTGCACTGCCTCTGGCGGCCTGCGCCTGTGTACCGGCGATCGGTGCCGATAAAACCGCAG
AGAAGGGCGAAACCCTGGTG

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRNSLIFLLLSLLFGFFGVQAKMVTDITGRQVEVPDNPQRIVLGESRMLYTLALLEPGNPAQRIVGWPEDMARFDAQSWQ
LYTQKFPQIKAIPSISKGNFRQVNIENLIRLKPDLVILARYAREEGDSDLLLSALSKAGIAVIYVDLRVDLLNNTVPSVR
LLGEVLNRQPRAEQFINFYQQHMAVIQQRLAGYQGPKPKVMLHLHLGRRETCCTTAAHGNLGDLLTFAGGDNIANASIKG
VYGELNPETILTANPDIYIATGMAGPQGKHFSDLRLGPLVTQQEADESFSRVMQKQPMLANLKAIKNHQAWSIWHNFYLS
PYHVVAVEMFAKTLYPDLFADINPQQTFKQLYQQFLPLPFSGTYWSQLNNE

Sequences:

>Translated_371_residues
MRNSLIFLLLSLLFGFFGVQAKMVTDITGRQVEVPDNPQRIVLGESRMLYTLALLEPGNPAQRIVGWPEDMARFDAQSWQ
LYTQKFPQIKAIPSISKGNFRQVNIENLIRLKPDLVILARYAREEGDSDLLLSALSKAGIAVIYVDLRVDLLNNTVPSVR
LLGEVLNRQPRAEQFINFYQQHMAVIQQRLAGYQGPKPKVMLHLHLGRRETCCTTAAHGNLGDLLTFAGGDNIANASIKG
VYGELNPETILTANPDIYIATGMAGPQGKHFSDLRLGPLVTQQEADESFSRVMQKQPMLANLKAIKNHQAWSIWHNFYLS
PYHVVAVEMFAKTLYPDLFADINPQQTFKQLYQQFLPLPFSGTYWSQLNNE
>Mature_371_residues
MRNSLIFLLLSLLFGFFGVQAKMVTDITGRQVEVPDNPQRIVLGESRMLYTLALLEPGNPAQRIVGWPEDMARFDAQSWQ
LYTQKFPQIKAIPSISKGNFRQVNIENLIRLKPDLVILARYAREEGDSDLLLSALSKAGIAVIYVDLRVDLLNNTVPSVR
LLGEVLNRQPRAEQFINFYQQHMAVIQQRLAGYQGPKPKVMLHLHLGRRETCCTTAAHGNLGDLLTFAGGDNIANASIKG
VYGELNPETILTANPDIYIATGMAGPQGKHFSDLRLGPLVTQQEADESFSRVMQKQPMLANLKAIKNHQAWSIWHNFYLS
PYHVVAVEMFAKTLYPDLFADINPQQTFKQLYQQFLPLPFSGTYWSQLNNE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41858; Mature: 41858

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSLIFLLLSLLFGFFGVQAKMVTDITGRQVEVPDNPQRIVLGESRMLYTLALLEPGNP
CCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCH
AQRIVGWPEDMARFDAQSWQLYTQKFPQIKAIPSISKGNFRQVNIENLIRLKPDLVILAR
HHHHCCCHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCCEEEECHHHHHHCCCCHHEEEH
YAREEGDSDLLLSALSKAGIAVIYVDLRVDLLNNTVPSVRLLGEVLNRQPRAEQFINFYQ
HHHCCCCHHHHHHHHHHCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHH
QHMAVIQQRLAGYQGPKPKVMLHLHLGRRETCCTTAAHGNLGDLLTFAGGDNIANASIKG
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHEEEECCCCCCCCCEEEE
VYGELNPETILTANPDIYIATGMAGPQGKHFSDLRLGPLVTQQEADESFSRVMQKQPMLA
EECCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
NLKAIKNHQAWSIWHNFYLSPYHVVAVEMFAKTLYPDLFADINPQQTFKQLYQQFLPLPF
HHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCCC
SGTYWSQLNNE
CCCHHHHCCCC
>Mature Secondary Structure
MRNSLIFLLLSLLFGFFGVQAKMVTDITGRQVEVPDNPQRIVLGESRMLYTLALLEPGNP
CCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCH
AQRIVGWPEDMARFDAQSWQLYTQKFPQIKAIPSISKGNFRQVNIENLIRLKPDLVILAR
HHHHCCCHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCCEEEECHHHHHHCCCCHHEEEH
YAREEGDSDLLLSALSKAGIAVIYVDLRVDLLNNTVPSVRLLGEVLNRQPRAEQFINFYQ
HHHCCCCHHHHHHHHHHCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHH
QHMAVIQQRLAGYQGPKPKVMLHLHLGRRETCCTTAAHGNLGDLLTFAGGDNIANASIKG
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHEEEECCCCCCCCCEEEE
VYGELNPETILTANPDIYIATGMAGPQGKHFSDLRLGPLVTQQEADESFSRVMQKQPMLA
EECCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
NLKAIKNHQAWSIWHNFYLSPYHVVAVEMFAKTLYPDLFADINPQQTFKQLYQQFLPLPF
HHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCCC
SGTYWSQLNNE
CCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]