| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pcaK [H]
Identifier: 157369052
GI number: 157369052
Start: 902176
End: 903336
Strand: Reverse
Name: pcaK [H]
Synonym: Spro_0807
Alternate gene names: 157369052
Gene position: 903336-902176 (Counterclockwise)
Preceding gene: 157369054
Following gene: 157369051
Centisome position: 16.58
GC content: 57.62
Gene sequence:
>1161_bases ATGGCTCATTCCACCGAGTTGAATATTCAGCAGGCCATCGACGACAGCAAATTCTCGCTGTTTCACTGGACCTTGATCAT TTTGGGATTCCTGATCCTGGCCATTGATGGCTTTGACACTGCGGCCATGGGGTATATCGCCCCTTCGGTCGCCAAAGACT GGGGCATTGTGAAACAGGATCTCGGCCCGGTACTGAGCGCCGCCCTGTTGGGCCTGTCACTCGGTGCACTGGTTGCCGGA CCGATCTCCGACCGTATCGGTCGCAAACGGGTGTTGGTGTTTTCATGCCTGTTCTTCGGTCTTTCAAGCCTGGCCACCGC CTATGCCGGCTCACTCAATAGCCTGACGCTGTGGCGCTTTCTCACCGGTCTGGGGCTGGGAGCGGCAATGCCGAACGCCA TCACGCTGATTTCCGAATATGCACCGCAGCGCTGCCGTTCATTGGCGATTAACACCATGTACTGTGGTTTCCCTCTGGGT GCCGCAGGCGGCGGAGCGATTTCGTCATGGCTGATCCCGGCCTATGGCTGGCACAGCGTGCTGTTGCTGGGAGCGATCGC TCCGCTGGTGCTGACGGTATTGTTGATCCTGTTCCTGCCGGAATCGGTGAAGTACATGGTTAACCGCGGCAAAGACGCGA TCAAAATCAAACGCATTGCCCAGCGCTTTGTCAGCCAAAATCTCGATAACGTCACGCGTTTCTATCTGTATGAAGAGAAA CTGGCACAGTCGAAAACCAGCGTCGGCCTGTTGTTCACCCGGCCTTATCTGACCGGCACGCTGATGCTGTGGCTGACCTA CTTTATGGGGCTGGTAATTTATTACGTGCTGCTGAGCTGGATGCCTATTCTGATGCAGGGGCTGGGCTATCAGTTGGAGC AGTCGGCGATCCTGACCTCGCTGTTCACCTTCGGCGGCACCCTTGGCATTCTGGTGGCCGGCTGGCTGATGGATCGCTGG AACGCCCATAAGGTGGTGTCGAGCGGCTTTGTCATTACCGCGCTGCTGATCGTGGCGATGGCCACCGAGGACAGCCATAT CGTGCTGCTGGGCACCTTTATCTTCCTGATGGGGATTACCATGAACGGCGCGCAGTCCGGCCTGCAAACGCTGGCGGCGA CCTTCTACCCCACCCACAGTCGCGCAACCGGCATTGCCTAG
Upstream 100 bases:
>100_bases ATAAATCGCTCGCACGCAGATGTATATACAGGCAAGCACAAGCCGGACGCCAGTTTCGGCGGTTCATCCACCACAATCAC ATCTGCGTTTAGAGGGTGCC
Downstream 100 bases:
>100_bases ATGCAGGGTATCGGCCGCTTTGGTGGCGTGGCTGGTACCATGATGGGAGCGCAGCTGCTGGCCATGCAGTGGGAAGTGCA GAGTATCTTGATGTTCCTGT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAHSTELNIQQAIDDSKFSLFHWTLIILGFLILAIDGFDTAAMGYIAPSVAKDWGIVKQDLGPVLSAALLGLSLGALVAG PISDRIGRKRVLVFSCLFFGLSSLATAYAGSLNSLTLWRFLTGLGLGAAMPNAITLISEYAPQRCRSLAINTMYCGFPLG AAGGGAISSWLIPAYGWHSVLLLGAIAPLVLTVLLILFLPESVKYMVNRGKDAIKIKRIAQRFVSQNLDNVTRFYLYEEK LAQSKTSVGLLFTRPYLTGTLMLWLTYFMGLVIYYVLLSWMPILMQGLGYQLEQSAILTSLFTFGGTLGILVAGWLMDRW NAHKVVSSGFVITALLIVAMATEDSHIVLLGTFIFLMGITMNGAQSGLQTLAATFYPTHSRATGIA
Sequences:
>Translated_386_residues MAHSTELNIQQAIDDSKFSLFHWTLIILGFLILAIDGFDTAAMGYIAPSVAKDWGIVKQDLGPVLSAALLGLSLGALVAG PISDRIGRKRVLVFSCLFFGLSSLATAYAGSLNSLTLWRFLTGLGLGAAMPNAITLISEYAPQRCRSLAINTMYCGFPLG AAGGGAISSWLIPAYGWHSVLLLGAIAPLVLTVLLILFLPESVKYMVNRGKDAIKIKRIAQRFVSQNLDNVTRFYLYEEK LAQSKTSVGLLFTRPYLTGTLMLWLTYFMGLVIYYVLLSWMPILMQGLGYQLEQSAILTSLFTFGGTLGILVAGWLMDRW NAHKVVSSGFVITALLIVAMATEDSHIVLLGTFIFLMGITMNGAQSGLQTLAATFYPTHSRATGIA >Mature_385_residues AHSTELNIQQAIDDSKFSLFHWTLIILGFLILAIDGFDTAAMGYIAPSVAKDWGIVKQDLGPVLSAALLGLSLGALVAGP ISDRIGRKRVLVFSCLFFGLSSLATAYAGSLNSLTLWRFLTGLGLGAAMPNAITLISEYAPQRCRSLAINTMYCGFPLGA AGGGAISSWLIPAYGWHSVLLLGAIAPLVLTVLLILFLPESVKYMVNRGKDAIKIKRIAQRFVSQNLDNVTRFYLYEEKL AQSKTSVGLLFTRPYLTGTLMLWLTYFMGLVIYYVLLSWMPILMQGLGYQLEQSAILTSLFTFGGTLGILVAGWLMDRWN AHKVVSSGFVITALLIVAMATEDSHIVLLGTFIFLMGITMNGAQSGLQTLAATFYPTHSRATGIA
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=404, Percent_Identity=24.5049504950495, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI7662270, Length=338, Percent_Identity=23.0769230769231, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI166064021, Length=236, Percent_Identity=27.9661016949153, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI73695465, Length=343, Percent_Identity=22.7405247813411, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI216548223, Length=203, Percent_Identity=26.1083743842365, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87081723, Length=363, Percent_Identity=35.2617079889807, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI87082159, Length=380, Percent_Identity=26.5789473684211, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI87082231, Length=385, Percent_Identity=24.1558441558442, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788074, Length=256, Percent_Identity=26.171875, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1788068, Length=392, Percent_Identity=24.234693877551, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786229, Length=381, Percent_Identity=23.0971128608924, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789312, Length=305, Percent_Identity=23.6065573770492, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789207, Length=281, Percent_Identity=24.5551601423488, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87082404, Length=181, Percent_Identity=26.5193370165746, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789152, Length=312, Percent_Identity=22.7564102564103, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI32564663, Length=282, Percent_Identity=23.0496453900709, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640198, Length=309, Percent_Identity=25.5663430420712, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24640196, Length=309, Percent_Identity=25.5663430420712, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24640200, Length=309, Percent_Identity=25.5663430420712, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI19922874, Length=388, Percent_Identity=23.4536082474227, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24646916, Length=343, Percent_Identity=25.6559766763848, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41842; Mature: 41711
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSTELNIQQAIDDSKFSLFHWTLIILGFLILAIDGFDTAAMGYIAPSVAKDWGIVKQD CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGPVLSAALLGLSLGALVAGPISDRIGRKRVLVFSCLFFGLSSLATAYAGSLNSLTLWRF HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTGLGLGAAMPNAITLISEYAPQRCRSLAINTMYCGFPLGAAGGGAISSWLIPAYGWHSV HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCHHHH LLLGAIAPLVLTVLLILFLPESVKYMVNRGKDAIKIKRIAQRFVSQNLDNVTRFYLYEEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAQSKTSVGLLFTRPYLTGTLMLWLTYFMGLVIYYVLLSWMPILMQGLGYQLEQSAILTS HHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTFGGTLGILVAGWLMDRWNAHKVVSSGFVITALLIVAMATEDSHIVLLGTFIFLMGIT HHHHCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCC MNGAQSGLQTLAATFYPTHSRATGIA CCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AHSTELNIQQAIDDSKFSLFHWTLIILGFLILAIDGFDTAAMGYIAPSVAKDWGIVKQD CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGPVLSAALLGLSLGALVAGPISDRIGRKRVLVFSCLFFGLSSLATAYAGSLNSLTLWRF HHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTGLGLGAAMPNAITLISEYAPQRCRSLAINTMYCGFPLGAAGGGAISSWLIPAYGWHSV HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCHHHH LLLGAIAPLVLTVLLILFLPESVKYMVNRGKDAIKIKRIAQRFVSQNLDNVTRFYLYEEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAQSKTSVGLLFTRPYLTGTLMLWLTYFMGLVIYYVLLSWMPILMQGLGYQLEQSAILTS HHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTFGGTLGILVAGWLMDRWNAHKVVSSGFVITALLIVAMATEDSHIVLLGTFIFLMGIT HHHHCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCC MNGAQSGLQTLAATFYPTHSRATGIA CCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]