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The map label for this gene is ppdD [H]

Identifier: 157369023

GI number: 157369023

Start: 867698

End: 868147

Strand: Reverse

Name: ppdD [H]

Synonym: Spro_0778

Alternate gene names: 157369023

Gene position: 868147-867698 (Counterclockwise)

Preceding gene: 157369024

Following gene: 157369022

Centisome position: 15.93

GC content: 58.0

Gene sequence:

>450_bases
ATGGAAACACAGCGCGGCTTTACCCTAATCGAACTGATGGTGGTGATCGCCATTATCGCCATCCTGAGCGCCATAGGCAT
TCCCGCCTACCAGCGCTATATCCAAAAAGCAGCGATGACCGACATGCTGCAAACCATGACGCCGTATAAACTGGCCGTTG
AGTTGTGCGTGCTCGACACTGGCGCACCAACCGGCTGTAATGCCGGCAGCCAAGGTATCCCTGCCGGTGATGCCTCACGC
TACGTCAGCGCAGTCAAGGTCACCCAGGGCGTGATCTCACTGACCGGTACGCAAACGCTGCAAGGGCTGACGGTCGCACT
AACCCCAACCCAAAACGCCAGCGGCCTGACCCGTTGGACACGTCAGTGCACCAGCAGCAACGCCAATCTGCAGGAAACCT
GTCAGGAAGTTTTCCGTTTTGACGCCACCGCAACGGCACCAACGCCATGA

Upstream 100 bases:

>100_bases
AATTGCTGTGGAACTGCGCCCAAAAACGACCATAACCCGCTCGAAACCCACGTCCTGTACGCTTACCTTTGCTTCCACAT
TCACACGGAGGCAACAACAG

Downstream 100 bases:

>100_bases
GTACGGCAATCAGTGACGAAATCCATGCGCTGTGCCGCCGTTATCAGGCACTGGCTCTCAGCGAAGATCGGTACTGCCTG
AATGTGGCCCTGACTACGGA

Product: putative major pilin subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
METQRGFTLIELMVVIAIIAILSAIGIPAYQRYIQKAAMTDMLQTMTPYKLAVELCVLDTGAPTGCNAGSQGIPAGDASR
YVSAVKVTQGVISLTGTQTLQGLTVALTPTQNASGLTRWTRQCTSSNANLQETCQEVFRFDATATAPTP

Sequences:

>Translated_149_residues
METQRGFTLIELMVVIAIIAILSAIGIPAYQRYIQKAAMTDMLQTMTPYKLAVELCVLDTGAPTGCNAGSQGIPAGDASR
YVSAVKVTQGVISLTGTQTLQGLTVALTPTQNASGLTRWTRQCTSSNANLQETCQEVFRFDATATAPTP
>Mature_149_residues
METQRGFTLIELMVVIAIIAILSAIGIPAYQRYIQKAAMTDMLQTMTPYKLAVELCVLDTGAPTGCNAGSQGIPAGDASR
YVSAVKVTQGVISLTGTQTLQGLTVALTPTQNASGLTRWTRQCTSSNANLQETCQEVFRFDATATAPTP

Specific function: Not yet known [H]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=143, Percent_Identity=61.5384615384615, Blast_Score=183, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 15789; Mature: 15789

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQRGFTLIELMVVIAIIAILSAIGIPAYQRYIQKAAMTDMLQTMTPYKLAVELCVLDT
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
GAPTGCNAGSQGIPAGDASRYVSAVKVTQGVISLTGTQTLQGLTVALTPTQNASGLTRWT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCHHHHHH
RQCTSSNANLQETCQEVFRFDATATAPTP
HHHHCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
METQRGFTLIELMVVIAIIAILSAIGIPAYQRYIQKAAMTDMLQTMTPYKLAVELCVLDT
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
GAPTGCNAGSQGIPAGDASRYVSAVKVTQGVISLTGTQTLQGLTVALTPTQNASGLTRWT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCHHHHHH
RQCTSSNANLQETCQEVFRFDATATAPTP
HHHHCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7959070; 8202364; 9278503 [H]