| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157368862
Identifier: 157368862
GI number: 157368862
Start: 683089
End: 684261
Strand: Reverse
Name: 157368862
Synonym: Spro_0617
Alternate gene names: NA
Gene position: 684261-683089 (Counterclockwise)
Preceding gene: 157368863
Following gene: 157368861
Centisome position: 12.56
GC content: 63.09
Gene sequence:
>1173_bases ATGTCCAGTGATTCTGTTTCCGTACCCGCAGCCGGGGCGGCTCTCCCCTGCCCGCCGCGGCTGTTGACCGCCATTATTAT CTTTGCCGCCATCGCGCCGGGCATTCTGATGACCGCACCGGCGGTAGCGGCACAACTGGCCAGCCAGTGGCAGCTGACCC CGGCGCAAGTCGGCCACCTGTTTTCGACCGAACTGGGGGCGATGAGCCTAGCCACGCTACCCGCCTGGTGGTGGATTGGC CGCGTTAACTGGCGTCGGGTGGCAGCGCTGGCGGCAGGGGTGTTTATCGCCGGTAACCTGGCCTCGGCGTGGGTCAACGA TTTCGGCCTGCTGCTGGGGTTGCGCTTTGTCGCTTCGCTGGCGGGCGGCACCCTGATGATCCTGTGCATCACCTGCGCCG CCGGCACCGCCAACCCCAGCCGGGTCTATGCCCTGTGGGTGCTGGGCCAACTGGTGCTGGGGACGATCGGGCTGCTGGTG CTGCCGCCGTTGTTTGCCCATTTTGGCCTGATGGCGGTCTATCTGATCCTGGCAGCCATCATGCTGTGCTGCCTGCCTCT GATCGCTGCCTTCCCCAGCGGGTTTCACCCGGTGTACTCCGCCGTCCATCGCGCCGCAATCCCCTGGTTTCGTAAACTCT TCGCCGTGCTGGCGGTACTGACTTTTTACATCAGCCTGAGCGCGGTCTGGACCTTTATCGGCAGCATCGCCGCCGCTGCT GGTCTTTCGCCGGTCAATAGCGGACAGATACTGGCCGCGGCCACGCTGTTCGGCATCGCCGGTGCCGGGGGTGCGGCGTT AATCCGAGGGCGGCACGCGGGTAATCGACTGATTTGGCTGAGCTATGGCTTGTTAATCGCCGGTATCGCGCTGCTGACTC GTGAGCCACTGCTGTTGCGCTTTGCGGTGGCCGCCGTGTTGTTCAAGTTCACCTGGACCTTTGTACTGCCGTTTATTCTG GCCCGCGTCGCCGGGCTGGATAACAACGGCAAGTTGATGAACAACATCAATCTGGTGATTGGCGGTGGCATGGCGATTGG CCCGACGCTGGCCGGTTATCTGATTGAATCTTTCGGTGGTTTCGACGCACTGCTGGCCGGGGCGCTGGGCTGCTCGCTGC TGTCGTTGCTGTTGATTTTGTTGGCTTCACCGCGCGATCGCCGCGCCGTTTAA
Upstream 100 bases:
>100_bases ACGCGTTAATTATTCGCCATTAATGGCGCGGTTTCCGCCTGCCCAAAACAGGGTACCGCGGATATATCTGACCCAGACTT GCCCGGTGGAGATAATTTTT
Downstream 100 bases:
>100_bases CAGGAGTAATAAGGTGAAAAGAAAAACCGGTTTCTTGTTTGATGAACGCTGCTTCTGGCATAGCACCGGCCTGCACGCCA CTACGCTACCGGTCGGCGGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Facilitator Family Transporter; MFS-Type Transporter
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSSDSVSVPAAGAALPCPPRLLTAIIIFAAIAPGILMTAPAVAAQLASQWQLTPAQVGHLFSTELGAMSLATLPAWWWIG RVNWRRVAALAAGVFIAGNLASAWVNDFGLLLGLRFVASLAGGTLMILCITCAAGTANPSRVYALWVLGQLVLGTIGLLV LPPLFAHFGLMAVYLILAAIMLCCLPLIAAFPSGFHPVYSAVHRAAIPWFRKLFAVLAVLTFYISLSAVWTFIGSIAAAA GLSPVNSGQILAAATLFGIAGAGGAALIRGRHAGNRLIWLSYGLLIAGIALLTREPLLLRFAVAAVLFKFTWTFVLPFIL ARVAGLDNNGKLMNNINLVIGGGMAIGPTLAGYLIESFGGFDALLAGALGCSLLSLLLILLASPRDRRAV
Sequences:
>Translated_390_residues MSSDSVSVPAAGAALPCPPRLLTAIIIFAAIAPGILMTAPAVAAQLASQWQLTPAQVGHLFSTELGAMSLATLPAWWWIG RVNWRRVAALAAGVFIAGNLASAWVNDFGLLLGLRFVASLAGGTLMILCITCAAGTANPSRVYALWVLGQLVLGTIGLLV LPPLFAHFGLMAVYLILAAIMLCCLPLIAAFPSGFHPVYSAVHRAAIPWFRKLFAVLAVLTFYISLSAVWTFIGSIAAAA GLSPVNSGQILAAATLFGIAGAGGAALIRGRHAGNRLIWLSYGLLIAGIALLTREPLLLRFAVAAVLFKFTWTFVLPFIL ARVAGLDNNGKLMNNINLVIGGGMAIGPTLAGYLIESFGGFDALLAGALGCSLLSLLLILLASPRDRRAV >Mature_389_residues SSDSVSVPAAGAALPCPPRLLTAIIIFAAIAPGILMTAPAVAAQLASQWQLTPAQVGHLFSTELGAMSLATLPAWWWIGR VNWRRVAALAAGVFIAGNLASAWVNDFGLLLGLRFVASLAGGTLMILCITCAAGTANPSRVYALWVLGQLVLGTIGLLVL PPLFAHFGLMAVYLILAAIMLCCLPLIAAFPSGFHPVYSAVHRAAIPWFRKLFAVLAVLTFYISLSAVWTFIGSIAAAAG LSPVNSGQILAAATLFGIAGAGGAALIRGRHAGNRLIWLSYGLLIAGIALLTREPLLLRFAVAAVLFKFTWTFVLPFILA RVAGLDNNGKLMNNINLVIGGGMAIGPTLAGYLIESFGGFDALLAGALGCSLLSLLLILLASPRDRRAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40605; Mature: 40474
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDSVSVPAAGAALPCPPRLLTAIIIFAAIAPGILMTAPAVAAQLASQWQLTPAQVGHL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHH FSTELGAMSLATLPAWWWIGRVNWRRVAALAAGVFIAGNLASAWVNDFGLLLGLRFVASL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGTLMILCITCAAGTANPSRVYALWVLGQLVLGTIGLLVLPPLFAHFGLMAVYLILAAI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLCCLPLIAAFPSGFHPVYSAVHRAAIPWFRKLFAVLAVLTFYISLSAVWTFIGSIAAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSPVNSGQILAAATLFGIAGAGGAALIRGRHAGNRLIWLSYGLLIAGIALLTREPLLLR CCCCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHH FAVAAVLFKFTWTFVLPFILARVAGLDNNGKLMNNINLVIGGGMAIGPTLAGYLIESFGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHHCC FDALLAGALGCSLLSLLLILLASPRDRRAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSDSVSVPAAGAALPCPPRLLTAIIIFAAIAPGILMTAPAVAAQLASQWQLTPAQVGHL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHH FSTELGAMSLATLPAWWWIGRVNWRRVAALAAGVFIAGNLASAWVNDFGLLLGLRFVASL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGTLMILCITCAAGTANPSRVYALWVLGQLVLGTIGLLVLPPLFAHFGLMAVYLILAAI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLCCLPLIAAFPSGFHPVYSAVHRAAIPWFRKLFAVLAVLTFYISLSAVWTFIGSIAAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSPVNSGQILAAATLFGIAGAGGAALIRGRHAGNRLIWLSYGLLIAGIALLTREPLLLR CCCCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHH FAVAAVLFKFTWTFVLPFILARVAGLDNNGKLMNNINLVIGGGMAIGPTLAGYLIESFGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHHCC FDALLAGALGCSLLSLLLILLASPRDRRAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA