| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhbE [H]
Identifier: 157368722
GI number: 157368722
Start: 524792
End: 525796
Strand: Direct
Name: yhbE [H]
Synonym: Spro_0475
Alternate gene names: 157368722
Gene position: 524792-525796 (Clockwise)
Preceding gene: 157368721
Following gene: 157368723
Centisome position: 9.63
GC content: 55.32
Gene sequence:
>1005_bases ATGCATCGGCCCGTCAGCGCTGGCAAAGGTAAGATGGAAACAAAACAGCAGGTCGGAATTGGCATTTCTCTGGCGGTGAC TACGGCAGTTTGCTGGGGCGCATTGCCGATTGCGATGAAAGAAGTGCTGGTAGTGATGGATCCGTTTACCATCGTTTGGT ATCGATTTACCATGGCTGCACTTGGGTTGGGGCTGATTTTGGCCGTGCGCGGCAAGTTGCCGCCGGTGACCCTGTTCCGT CAACCGCGCTGGTTGTTGATTCTGGCCATCGCCACCGCAGGCCTGCTGGGGAATTTTATTTTCTTCAGCTCTTCGCTGCA GTATCTCAGCCCGACAGCATCACAGGTGATCGGCCAGTTATCGCCGGTCGGCATGATGTTTGCCAGTGTGCTGATTTTAA AAGAGCGGATGCGCATCACTCAGGTGATTGGCGCGCTGATGCTGATCTGCGGGTTGCTGTTGTTTTTCAACGTCAGCCTG ATTGAGATTTTCACCCGCCTGACAGATTACACCCTTGGGGTGCTGCTGGGTGTGTGTGCGGCAATGGTCTGGGTCACTTA TGGCGTTGCGCAGAAAGTGTTGCTGCGTCGATTAGCCTCGCCGCAAATTCTGGTAATGTTGTACACTTTATGTGCAGTGG CGTTATTTCCTCTGGCCAGGCCGGAGGGGATTTTCCAGCTCAGCGGCTGGCAATTAGCCTGTTTGCTGTTCTGTGGTGCC AACACGTTGATTGGTTATGGTGCGCTGGCTGAAGCAATGGCGCGCTGGCAGGCGGCACAGGTGAGTGCGTTAGTTACGCT GACACCGCTGTTTACCCTGCTTTTTTCAGATTTATTGGCGCTGGCCTGGCCACACGTATTCGCCGCCCCGACCTTAAATG TCGTCGGCTATGTCGGTGCTTTCGTAGTGGTAGCGGGCGCCATGTTTTCCGCAATTGGTCACCGTTGGTGGCCGCGACGG GCAGAACCCCGCCTGGTTGCTCCTTTGAAGCAGCCCGGTGAATGA
Upstream 100 bases:
>100_bases TAAATTTATCAGCATCGAAGCTGAATAATTTTTCGAGCCTTACTAAATAGATGTAAGCCCCGCAATTCGTTGCGGGGCTT TTTACATTTATGGGCTGCTT
Downstream 100 bases:
>100_bases TTTACGGAGACGGTAAATGAAGTTTGTAGATGAAGCAGCGATCTTGGTCGTTGCAGGTGACGGTGGTAATGGTTGCGTCA GCTTCCGTCGCGAAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MHRPVSAGKGKMETKQQVGIGISLAVTTAVCWGALPIAMKEVLVVMDPFTIVWYRFTMAALGLGLILAVRGKLPPVTLFR QPRWLLILAIATAGLLGNFIFFSSSLQYLSPTASQVIGQLSPVGMMFASVLILKERMRITQVIGALMLICGLLLFFNVSL IEIFTRLTDYTLGVLLGVCAAMVWVTYGVAQKVLLRRLASPQILVMLYTLCAVALFPLARPEGIFQLSGWQLACLLFCGA NTLIGYGALAEAMARWQAAQVSALVTLTPLFTLLFSDLLALAWPHVFAAPTLNVVGYVGAFVVVAGAMFSAIGHRWWPRR AEPRLVAPLKQPGE
Sequences:
>Translated_334_residues MHRPVSAGKGKMETKQQVGIGISLAVTTAVCWGALPIAMKEVLVVMDPFTIVWYRFTMAALGLGLILAVRGKLPPVTLFR QPRWLLILAIATAGLLGNFIFFSSSLQYLSPTASQVIGQLSPVGMMFASVLILKERMRITQVIGALMLICGLLLFFNVSL IEIFTRLTDYTLGVLLGVCAAMVWVTYGVAQKVLLRRLASPQILVMLYTLCAVALFPLARPEGIFQLSGWQLACLLFCGA NTLIGYGALAEAMARWQAAQVSALVTLTPLFTLLFSDLLALAWPHVFAAPTLNVVGYVGAFVVVAGAMFSAIGHRWWPRR AEPRLVAPLKQPGE >Mature_334_residues MHRPVSAGKGKMETKQQVGIGISLAVTTAVCWGALPIAMKEVLVVMDPFTIVWYRFTMAALGLGLILAVRGKLPPVTLFR QPRWLLILAIATAGLLGNFIFFSSSLQYLSPTASQVIGQLSPVGMMFASVLILKERMRITQVIGALMLICGLLLFFNVSL IEIFTRLTDYTLGVLLGVCAAMVWVTYGVAQKVLLRRLASPQILVMLYTLCAVALFPLARPEGIFQLSGWQLACLLFCGA NTLIGYGALAEAMARWQAAQVSALVTLTPLFTLLFSDLLALAWPHVFAAPTLNVVGYVGAFVVVAGAMFSAIGHRWWPRR AEPRLVAPLKQPGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI1789575, Length=320, Percent_Identity=74.375, Blast_Score=476, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 36265; Mature: 36265
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRPVSAGKGKMETKQQVGIGISLAVTTAVCWGALPIAMKEVLVVMDPFTIVWYRFTMAA CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LGLGLILAVRGKLPPVTLFRQPRWLLILAIATAGLLGNFIFFSSSLQYLSPTASQVIGQL HHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHC SPVGMMFASVLILKERMRITQVIGALMLICGLLLFFNVSLIEIFTRLTDYTLGVLLGVCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVWVTYGVAQKVLLRRLASPQILVMLYTLCAVALFPLARPEGIFQLSGWQLACLLFCGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCC NTLIGYGALAEAMARWQAAQVSALVTLTPLFTLLFSDLLALAWPHVFAAPTLNVVGYVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH FVVVAGAMFSAIGHRWWPRRAEPRLVAPLKQPGE HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MHRPVSAGKGKMETKQQVGIGISLAVTTAVCWGALPIAMKEVLVVMDPFTIVWYRFTMAA CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LGLGLILAVRGKLPPVTLFRQPRWLLILAIATAGLLGNFIFFSSSLQYLSPTASQVIGQL HHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHC SPVGMMFASVLILKERMRITQVIGALMLICGLLLFFNVSLIEIFTRLTDYTLGVLLGVCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVWVTYGVAQKVLLRRLASPQILVMLYTLCAVALFPLARPEGIFQLSGWQLACLLFCGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCC NTLIGYGALAEAMARWQAAQVSALVTLTPLFTLLFSDLLALAWPHVFAAPTLNVVGYVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH FVVVAGAMFSAIGHRWWPRRAEPRLVAPLKQPGE HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]