| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hflK [H]
Identifier: 157368680
GI number: 157368680
Start: 484922
End: 486181
Strand: Direct
Name: hflK [H]
Synonym: Spro_0433
Alternate gene names: 157368680
Gene position: 484922-486181 (Clockwise)
Preceding gene: 157368679
Following gene: 157368681
Centisome position: 8.9
GC content: 57.86
Gene sequence:
>1260_bases ATGGCGTGGAATCAGCCCGGTAATAACGGACAGGACCGCGACCCGTGGGGGAGCAGCAATAACAATGGCGGCAACTCTGG CGGTAATAACAAAGGCGGTCGCGATCAAGGGCCACCTGATTTGGACGATATCTTCCGCAAGCTGAGCAAGAAACTGAGCG GCTTGGGCGGGGGCAAAGGCTCCAACAACAATAACGACGGCGGTACTGGCACTTCGGGGCCGGGCTTTAGCGGTCGTATT ATCGGTATCGCTGCGGTTGCGGTGGTGGTGATTTGGGCCGCCAGCGGTTTCTACACCATCAAAGAAGCCGAGCGCGGTGT CGTGACTCGTTTCGGCAAGTTCAGCCACCTGGTGCAGCCGGGTCTGAACTGGAAGCCGACCTTCATCGATGAAGTGCGTC CGGTCAACGTAGAGTCGGTGCGTGAACTGGCCGCTTCTGGCGTGATGCTGACCTCCGATGAGAACGTGGTGCGCGTAGAA ATGAACGTGCAGTACCGCGTGACCAATCCGGAAGCCTATCTGTTCAGCGTGACCAACGCCGACGATAGCCTGAGCCAGGC TACTGACAGCGCCCTGCGTGGCGTTATCGGCAAGTACACCATGGACAAGATCCTGACCGAAGGCCGTACTATCGTGCGTA GCGATACCCAACGCGTACTGGAAGAGACTATTCGTCCGTACAACATGGGCATCACGCTGCTGGACGTCAACTTCCAGGCC GCTCGTCCGCCGGAAGAGGTGAAAGCCGCATTTGATGATGCGATTGCCGCACGTGAGAACGAGCAGCAGTACATCCGTGA GGCAGAAGCTTACGCCAACGAAGTTCAGCCACGCGCTAATGGCCAGGCACAGCGTCTGTTGGAAGATGCCAAAGCCTATA AAGACCGTACCGTCCTGGAAGCACAGGGTGAGGTTGCGGGCTTTGCCAAGCTGTTGCCGGAATACAAGTCTGCACCGCAA ATCACCCGCGAGCGTCTGTATATCGAAACCATGGAAAAAGTCCTGAGCCACACCCGTAAAGTGTTGGTGAATGACAAAGG CAACAATCTTATGGTGTTACCGCTGGATCAAATGCTGCGTGGCCAAACCGGCGCGGCGGCTGAAGGCAGTAAAGACACCA GCCTGATTCGTCTCAACCCCGCTCCGTCTGCCAACAGCGGCGCCAGCTCCAGCAGCCAGCGCACCAGTAACGGCACGGTC ATGGACCAGCGCCGGGCGAATGCGCAGCGTGACGACACCACTCGCGTAGGGAGAGAATAA
Upstream 100 bases:
>100_bases AGGAACTGGATCTGATTAACTTTATAGTATGATCATATCCTGTTACATTTGAGCTTCGCGTAAGCCTGAAGTACCCAATC ACAGAATATGGAGCTAAAAC
Downstream 100 bases:
>100_bases TCAATGCGTAAGTCTTTTATAGTAATTATCCTCGCGGTGCTGGTGGCGTTGTATGCATCCTTGTTCGTGGTTCAGGAAGG TCAGCGCGGCATCGTGCTGC
Product: FtsH protease regulator HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAWNQPGNNGQDRDPWGSSNNNGGNSGGNNKGGRDQGPPDLDDIFRKLSKKLSGLGGGKGSNNNNDGGTGTSGPGFSGRI IGIAAVAVVVIWAASGFYTIKEAERGVVTRFGKFSHLVQPGLNWKPTFIDEVRPVNVESVRELAASGVMLTSDENVVRVE MNVQYRVTNPEAYLFSVTNADDSLSQATDSALRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYNMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGQAQRLLEDAKAYKDRTVLEAQGEVAGFAKLLPEYKSAPQ ITRERLYIETMEKVLSHTRKVLVNDKGNNLMVLPLDQMLRGQTGAAAEGSKDTSLIRLNPAPSANSGASSSSQRTSNGTV MDQRRANAQRDDTTRVGRE
Sequences:
>Translated_419_residues MAWNQPGNNGQDRDPWGSSNNNGGNSGGNNKGGRDQGPPDLDDIFRKLSKKLSGLGGGKGSNNNNDGGTGTSGPGFSGRI IGIAAVAVVVIWAASGFYTIKEAERGVVTRFGKFSHLVQPGLNWKPTFIDEVRPVNVESVRELAASGVMLTSDENVVRVE MNVQYRVTNPEAYLFSVTNADDSLSQATDSALRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYNMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGQAQRLLEDAKAYKDRTVLEAQGEVAGFAKLLPEYKSAPQ ITRERLYIETMEKVLSHTRKVLVNDKGNNLMVLPLDQMLRGQTGAAAEGSKDTSLIRLNPAPSANSGASSSSQRTSNGTV MDQRRANAQRDDTTRVGRE >Mature_418_residues AWNQPGNNGQDRDPWGSSNNNGGNSGGNNKGGRDQGPPDLDDIFRKLSKKLSGLGGGKGSNNNNDGGTGTSGPGFSGRII GIAAVAVVVIWAASGFYTIKEAERGVVTRFGKFSHLVQPGLNWKPTFIDEVRPVNVESVRELAASGVMLTSDENVVRVEM NVQYRVTNPEAYLFSVTNADDSLSQATDSALRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYNMGITLLDVNFQAA RPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGQAQRLLEDAKAYKDRTVLEAQGEVAGFAKLLPEYKSAPQI TRERLYIETMEKVLSHTRKVLVNDKGNNLMVLPLDQMLRGQTGAAAEGSKDTSLIRLNPAPSANSGASSSSQRTSNGTVM DQRRANAQRDDTTRVGRE
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=418, Percent_Identity=78.7081339712919, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1786697, Length=220, Percent_Identity=24.5454545454545, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 45508; Mature: 45377
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNQPGNNGQDRDPWGSSNNNGGNSGGNNKGGRDQGPPDLDDIFRKLSKKLSGLGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC SNNNNDGGTGTSGPGFSGRIIGIAAVAVVVIWAASGFYTIKEAERGVVTRFGKFSHLVQP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDEVRPVNVESVRELAASGVMLTSDENVVRVEMNVQYRVTNPEAYLFSVTNA CCCCCCCHHHCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECCCEEEEEEECC DDSLSQATDSALRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYNMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCEEEEEECCCC ARPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGQAQRLLEDAKAYKDRTVLE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE AQGEVAGFAKLLPEYKSAPQITRERLYIETMEKVLSHTRKVLVNDKGNNLMVLPLDQMLR CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHC GQTGAAAEGSKDTSLIRLNPAPSANSGASSSSQRTSNGTVMDQRRANAQRDDTTRVGRE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHCCCC >Mature Secondary Structure AWNQPGNNGQDRDPWGSSNNNGGNSGGNNKGGRDQGPPDLDDIFRKLSKKLSGLGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC SNNNNDGGTGTSGPGFSGRIIGIAAVAVVVIWAASGFYTIKEAERGVVTRFGKFSHLVQP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDEVRPVNVESVRELAASGVMLTSDENVVRVEMNVQYRVTNPEAYLFSVTNA CCCCCCCHHHCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECCCEEEEEEECC DDSLSQATDSALRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYNMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCEEEEEECCCC ARPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGQAQRLLEDAKAYKDRTVLE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE AQGEVAGFAKLLPEYKSAPQITRERLYIETMEKVLSHTRKVLVNDKGNNLMVLPLDQMLR CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHC GQTGAAAEGSKDTSLIRLNPAPSANSGASSSSQRTSNGTVMDQRRANAQRDDTTRVGRE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]