Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yjeF [H]

Identifier: 157368673

GI number: 157368673

Start: 476550

End: 477938

Strand: Direct

Name: yjeF [H]

Synonym: Spro_0426

Alternate gene names: 157368673

Gene position: 476550-477938 (Clockwise)

Preceding gene: 157368671

Following gene: 157368674

Centisome position: 8.75

GC content: 60.19

Gene sequence:

>1389_bases
ATGCAACGTGCCGGTGAGGCTGCTTACATCCTGGCACGCGACCAGTACCCGGCCGCTCACCACTGGCTGGTGCTGTGTGG
CCATGGCAACAATGGCGGCGACGGTTACGTGGTCGCCAGACTGGCAGCGGCGGCCGGTGTTAAGGTCAGTTTGATCGCCT
GCGAAGGCACACGCCCACTGCCGCCCGAGGCCGCAGAAGCGCGACGGGCCTGGTTGGCCGCCGGTGGTGAAATTCATCCG
GCTGACAGTCGTTGGCCGGAAGATAGTGATCTGATCATCGACGGCTTGCTTGGTACCGGGCTGAGTCGTGCGCCGCGTGC
GCCATACGATGCGCTGATTGAAGCCGCGAACCGCAGCTGCGCACCGGTGATCGCACTTGATATTCCCTCGGGCTTGCTGG
CCGAAAGCGGTGCTGTGCCTGGGGTGGTGATCCGCGCTTCGCACACTATGACGTTTATTGCCCTCAAACCGGGCTTATTA
ACCGGTCAGGCCCGTGATTGGGTCGGGCAACTTCACCAGAGTACGCTAGGATTATCGGGTTGGCTGGCGAAGCAACCGAC
ACAGATTCAGCGGCTTACTGCCGAGTCCCTGCCTCTGTGGCTGAAACCGCGTCGTCCGTGCTCGCATAAAGGTGAACAAG
GGCGTTTGTTGGTGGTTGGCGGCGATCATGGTTTTGGCGGTGCGATACGCATGGCGGCAGAGGCGGCACTGCGCAGCGGT
GCCGGATTGGTGCGAGTACTTACTCACATCGAGCATGTCGGGCCATTATTGACCGCCAGGCCTGAGCTGATGGTACAGCC
TTTAAGTGACGAAACATTGCAGCAGGCGCTCGACTGGGCTGATGTACTGGTGGTGGGGCCGGGACTGGGTCAGGGCGAAT
GGGGTAGGAATGCGCTGAAAGTATTGCAAGCCAGTGATAAACCGGCGTTATGGGACGCGGATGCGTTGAACTTGCTGGCA
TTAAATCCCGAGAAGCGTCAGAATCGTGTGATTACCCCGCATCCTGGGGAGGCGGCACGCCTGCTGGGGTGCCGTACCGC
CGAGATTGAGAGTGATCGCTTACTTGCAGTGCGTAAACTGGTGGCGCAATACGGTGGCATAGCCGTGCTGAAAGGTGCGG
GCACGCTGATTGCCGACCAGTACGGCCAGATGGCGATCGCCGACGTCGGCAATGCCGGCATGGCCTCCGGCGGAATGGGC
GATGTTTTGTCGGGTATCATCGGCGGTTTGCTGGGGCAAAAGCTCTCGCTGTATGATGCAGCCTGTGCTGGATGTGTGGC
GCATGGCGCAGCCGCCGATCGCGTGGCGGCAAGACAAGGAATCAGGGGGATGCTGGCAAGTGACTTACTGCCGGAAATTC
CTTATTACGTTAATCCTGAGTTGGCATAA

Upstream 100 bases:

>100_bases
ATACTCCGCTAGTTTATCACACTCTGTCTGGTCTGCAGACTGGATCCGGCGGGCTGAAGCCAGCGCCGCTGCCTCGCTGG
GGATTTCACTCTACCAACTG

Downstream 100 bases:

>100_bases
ATAGAAACTATCGAATGAAAGAACTCGTTTTACCTCTGCCGGATGAGGCAGCGACTGTCGCACTGGGTGCCGTCTTGGCT
AAGGCGTGCGATCGTGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MQRAGEAAYILARDQYPAAHHWLVLCGHGNNGGDGYVVARLAAAAGVKVSLIACEGTRPLPPEAAEARRAWLAAGGEIHP
ADSRWPEDSDLIIDGLLGTGLSRAPRAPYDALIEAANRSCAPVIALDIPSGLLAESGAVPGVVIRASHTMTFIALKPGLL
TGQARDWVGQLHQSTLGLSGWLAKQPTQIQRLTAESLPLWLKPRRPCSHKGEQGRLLVVGGDHGFGGAIRMAAEAALRSG
AGLVRVLTHIEHVGPLLTARPELMVQPLSDETLQQALDWADVLVVGPGLGQGEWGRNALKVLQASDKPALWDADALNLLA
LNPEKRQNRVITPHPGEAARLLGCRTAEIESDRLLAVRKLVAQYGGIAVLKGAGTLIADQYGQMAIADVGNAGMASGGMG
DVLSGIIGGLLGQKLSLYDAACAGCVAHGAAADRVAARQGIRGMLASDLLPEIPYYVNPELA

Sequences:

>Translated_462_residues
MQRAGEAAYILARDQYPAAHHWLVLCGHGNNGGDGYVVARLAAAAGVKVSLIACEGTRPLPPEAAEARRAWLAAGGEIHP
ADSRWPEDSDLIIDGLLGTGLSRAPRAPYDALIEAANRSCAPVIALDIPSGLLAESGAVPGVVIRASHTMTFIALKPGLL
TGQARDWVGQLHQSTLGLSGWLAKQPTQIQRLTAESLPLWLKPRRPCSHKGEQGRLLVVGGDHGFGGAIRMAAEAALRSG
AGLVRVLTHIEHVGPLLTARPELMVQPLSDETLQQALDWADVLVVGPGLGQGEWGRNALKVLQASDKPALWDADALNLLA
LNPEKRQNRVITPHPGEAARLLGCRTAEIESDRLLAVRKLVAQYGGIAVLKGAGTLIADQYGQMAIADVGNAGMASGGMG
DVLSGIIGGLLGQKLSLYDAACAGCVAHGAAADRVAARQGIRGMLASDLLPEIPYYVNPELA
>Mature_462_residues
MQRAGEAAYILARDQYPAAHHWLVLCGHGNNGGDGYVVARLAAAAGVKVSLIACEGTRPLPPEAAEARRAWLAAGGEIHP
ADSRWPEDSDLIIDGLLGTGLSRAPRAPYDALIEAANRSCAPVIALDIPSGLLAESGAVPGVVIRASHTMTFIALKPGLL
TGQARDWVGQLHQSTLGLSGWLAKQPTQIQRLTAESLPLWLKPRRPCSHKGEQGRLLVVGGDHGFGGAIRMAAEAALRSG
AGLVRVLTHIEHVGPLLTARPELMVQPLSDETLQQALDWADVLVVGPGLGQGEWGRNALKVLQASDKPALWDADALNLLA
LNPEKRQNRVITPHPGEAARLLGCRTAEIESDRLLAVRKLVAQYGGIAVLKGAGTLIADQYGQMAIADVGNAGMASGGMG
DVLSGIIGGLLGQKLSLYDAACAGCVAHGAAADRVAARQGIRGMLASDLLPEIPYYVNPELA

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=226, Percent_Identity=32.7433628318584, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1790609, Length=461, Percent_Identity=68.1127982646421, Blast_Score=631, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554656, Length=279, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21357759, Length=275, Percent_Identity=31.6363636363636, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 48319; Mature: 48319

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRAGEAAYILARDQYPAAHHWLVLCGHGNNGGDGYVVARLAAAAGVKVSLIACEGTRPL
CCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCC
PPEAAEARRAWLAAGGEIHPADSRWPEDSDLIIDGLLGTGLSRAPRAPYDALIEAANRSC
CCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCCCC
APVIALDIPSGLLAESGAVPGVVIRASHTMTFIALKPGLLTGQARDWVGQLHQSTLGLSG
CEEEEEECCCCHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
WLAKQPTQIQRLTAESLPLWLKPRRPCSHKGEQGRLLVVGGDHGFGGAIRMAAEAALRSG
CCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
AGLVRVLTHIEHVGPLLTARPELMVQPLSDETLQQALDWADVLVVGPGLGQGEWGRNALK
CHHHHHHHHHHHHCHHHHCCCHHEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHH
VLQASDKPALWDADALNLLALNPEKRQNRVITPHPGEAARLLGCRTAEIESDRLLAVRKL
HHHCCCCCCEECCCCCEEEEECCHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
VAQYGGIAVLKGAGTLIADQYGQMAIADVGNAGMASGGMGDVLSGIIGGLLGQKLSLYDA
HHHHCCEEEEECCCCEEHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
ACAGCVAHGAAADRVAARQGIRGMLASDLLPEIPYYVNPELA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQRAGEAAYILARDQYPAAHHWLVLCGHGNNGGDGYVVARLAAAAGVKVSLIACEGTRPL
CCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCC
PPEAAEARRAWLAAGGEIHPADSRWPEDSDLIIDGLLGTGLSRAPRAPYDALIEAANRSC
CCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCCCC
APVIALDIPSGLLAESGAVPGVVIRASHTMTFIALKPGLLTGQARDWVGQLHQSTLGLSG
CEEEEEECCCCHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
WLAKQPTQIQRLTAESLPLWLKPRRPCSHKGEQGRLLVVGGDHGFGGAIRMAAEAALRSG
CCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
AGLVRVLTHIEHVGPLLTARPELMVQPLSDETLQQALDWADVLVVGPGLGQGEWGRNALK
CHHHHHHHHHHHHCHHHHCCCHHEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHH
VLQASDKPALWDADALNLLALNPEKRQNRVITPHPGEAARLLGCRTAEIESDRLLAVRKL
HHHCCCCCCEECCCCCEEEEECCHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
VAQYGGIAVLKGAGTLIADQYGQMAIADVGNAGMASGGMGDVLSGIIGGLLGQKLSLYDA
HHHHCCEEEEECCCCEEHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
ACAGCVAHGAAADRVAARQGIRGMLASDLLPEIPYYVNPELA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]