Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is asnB [H]
Identifier: 157368595
GI number: 157368595
Start: 397882
End: 399714
Strand: Direct
Name: asnB [H]
Synonym: Spro_0346
Alternate gene names: 157368595
Gene position: 397882-399714 (Clockwise)
Preceding gene: 157368594
Following gene: 157368596
Centisome position: 7.3
GC content: 55.05
Gene sequence:
>1833_bases ATGTGTGGTATTGCAGGCGTCATCAACTTTCATCGCCAACCGGCGCAGCCCCCACTGTTAGCGTCGATGTTAGCCGCTCT GACGCACCGTGGTCCCGATCAAGAGGGCACCTATCATCAAGGGCATGTCAGCATTGGCATGCGACGTTTGAAAATCATCG CGCTGGATAACGGCGCTCAGCCCTGCTACAGCAATGATGGGCGATATGTATTGGTGTTTAACGGTGAGATCTATAATTAC CGGGCTCTGCGCGCTGAGTTAATAGCGCAGGGATTTAGATTCGACACTGAATCCGACGCGGAAGTGATAGTTAACCTGTA TCAACGCGACGGTGAAGCCTTTTATCAGCGTCTGGATGGCATGTTCGCTCTGGCCATTTACGACAGAATCAGCGATACGC TGCTGCTGGCCCGCGATCCAGCCGGCAAGAAACCGCTGTTTTATGCCCTTCGCGACGGGGTAGTCAGCTTTTCGTCCGAG TTGAACTCCTTACTGAAGGATCAAAGCATCCCACGCCGTATCGATCCTGTGGCGCTGGATTATTATCTGCGCTTTCGTGT GGTGCCGGGCGATCGCTGCATTTTCCAGGGCATCAGTAAAGTGCCTGCCGGTGGCGGCGTCAGCTTCACGCTCGGGCAAG AAAGCCGACAGCACTATTGGCGCGTGGCCTATCGGCCGACGGAGGATGACAAGCCGCTGGAACAGTGGGTTGACGAGATC GACGAATATTTGAATCAGGCTATCGCCAAACGCTTGATGGCGGAAGTGCCGATCGGCACCATGCTAAGCGGTGGGCTTGA TTCCAGCCTGATTACTGCCATCGCCTGCCGGCAGGGCCGGCGTGAGCTGAAAACCTTCGCCGTGGGTTTCAATGAATCCG CCTTCAGTGAACTGGATTATTCCCGACGCCTGGCGAAAGATCTCGGCACCGAACATCATGATTACATTATTACACCACAG GAGGCATTTGACGCAGCACATGGGTTGGTCAGCCACTTCGGCGAGCCTTTTGCGTTCCCCTCTTCGATAGCCAGTCACTT TATGTATCGTCTGGCTCGTCAACATGTGACGGTGGTGCTGGGCGGCGATGGCGCCGACGAACTGTTTGGCGGCTATGCCC GCTACTCGCTGGTGGCCAATTTCCCTCATTTACCCACCGAGCATAACCTGCCGCGCAAGGTAGACCTGTTCAACAAGACG TGGCAGGCGGATGCATTCCCCGAATTTTATCAGGCGCTGTTGACCGATGGCGCAGGCGGCCAGTTGCGCCAACAGCTCTA CAGCCGACAAATGGCGTTGCAGTTGGCCGAGGAAAATAGCGTGGCGCAAGTCAGAAGCTACAGCGATGAATTGACGCAGC GTCCCGATCCTCTTTCCGCTGCTATGGAATATGATTTCAATCATTGGATGCAGGAAGCGCAGATGGTCAAGGTAGACATA GCCTCGATGGCCAATTCGCTCGAGGTGCGCGTTCCGTTCCTGGACAAGCAGGTCGTCGGGCTTGGCAGCAGTTTGCCGGC GCGGTTCAAACTGCACGCAGGCAAGGAGAAATATCTGTTGCACTGTCTGGCGAAACGCTACCTTCCCGACTATATCGTTA ATCGCAAAAAACAGGAGTTGGCAGTGCCATTGGAGCAGTGGATGGTGTCGTCGATGAAAACGCGCATCATCGACACGCTG ACCAGCGAGCAGGCGCTGTCGCGCGGGTATTTTAATCCTGACAGGCTGCGCCAGTTCGTCAGAGAATTCGACGCTGGCCA CAGCTACGCGTTGTGGACAATGTATATGCTGGAAAAATGGCACCAGCAGTTTGTAGACAATCAGGAGTCGTGA
Upstream 100 bases:
>100_bases GGACTGGTCGGGGATATCCGCATCCAGTGCGTCGACGCGCAGGAAATCGCCGGCAACGTCAGCAAACGCCGCTATTGAGC AGTATCAACGAGGAAAATCT
Downstream 100 bases:
>100_bases ATGACGGATCAAGGTAGGTACCTGTCAGGCGTGTTTTGTACGTTGCTGTATATTGTCATAGCCTCGACGCAGAGCGTGAT GTTGAATATCTGGCTGTTCG
Product: asparagine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MCGIAGVINFHRQPAQPPLLASMLAALTHRGPDQEGTYHQGHVSIGMRRLKIIALDNGAQPCYSNDGRYVLVFNGEIYNY RALRAELIAQGFRFDTESDAEVIVNLYQRDGEAFYQRLDGMFALAIYDRISDTLLLARDPAGKKPLFYALRDGVVSFSSE LNSLLKDQSIPRRIDPVALDYYLRFRVVPGDRCIFQGISKVPAGGGVSFTLGQESRQHYWRVAYRPTEDDKPLEQWVDEI DEYLNQAIAKRLMAEVPIGTMLSGGLDSSLITAIACRQGRRELKTFAVGFNESAFSELDYSRRLAKDLGTEHHDYIITPQ EAFDAAHGLVSHFGEPFAFPSSIASHFMYRLARQHVTVVLGGDGADELFGGYARYSLVANFPHLPTEHNLPRKVDLFNKT WQADAFPEFYQALLTDGAGGQLRQQLYSRQMALQLAEENSVAQVRSYSDELTQRPDPLSAAMEYDFNHWMQEAQMVKVDI ASMANSLEVRVPFLDKQVVGLGSSLPARFKLHAGKEKYLLHCLAKRYLPDYIVNRKKQELAVPLEQWMVSSMKTRIIDTL TSEQALSRGYFNPDRLRQFVREFDAGHSYALWTMYMLEKWHQQFVDNQES
Sequences:
>Translated_610_residues MCGIAGVINFHRQPAQPPLLASMLAALTHRGPDQEGTYHQGHVSIGMRRLKIIALDNGAQPCYSNDGRYVLVFNGEIYNY RALRAELIAQGFRFDTESDAEVIVNLYQRDGEAFYQRLDGMFALAIYDRISDTLLLARDPAGKKPLFYALRDGVVSFSSE LNSLLKDQSIPRRIDPVALDYYLRFRVVPGDRCIFQGISKVPAGGGVSFTLGQESRQHYWRVAYRPTEDDKPLEQWVDEI DEYLNQAIAKRLMAEVPIGTMLSGGLDSSLITAIACRQGRRELKTFAVGFNESAFSELDYSRRLAKDLGTEHHDYIITPQ EAFDAAHGLVSHFGEPFAFPSSIASHFMYRLARQHVTVVLGGDGADELFGGYARYSLVANFPHLPTEHNLPRKVDLFNKT WQADAFPEFYQALLTDGAGGQLRQQLYSRQMALQLAEENSVAQVRSYSDELTQRPDPLSAAMEYDFNHWMQEAQMVKVDI ASMANSLEVRVPFLDKQVVGLGSSLPARFKLHAGKEKYLLHCLAKRYLPDYIVNRKKQELAVPLEQWMVSSMKTRIIDTL TSEQALSRGYFNPDRLRQFVREFDAGHSYALWTMYMLEKWHQQFVDNQES >Mature_610_residues MCGIAGVINFHRQPAQPPLLASMLAALTHRGPDQEGTYHQGHVSIGMRRLKIIALDNGAQPCYSNDGRYVLVFNGEIYNY RALRAELIAQGFRFDTESDAEVIVNLYQRDGEAFYQRLDGMFALAIYDRISDTLLLARDPAGKKPLFYALRDGVVSFSSE LNSLLKDQSIPRRIDPVALDYYLRFRVVPGDRCIFQGISKVPAGGGVSFTLGQESRQHYWRVAYRPTEDDKPLEQWVDEI DEYLNQAIAKRLMAEVPIGTMLSGGLDSSLITAIACRQGRRELKTFAVGFNESAFSELDYSRRLAKDLGTEHHDYIITPQ EAFDAAHGLVSHFGEPFAFPSSIASHFMYRLARQHVTVVLGGDGADELFGGYARYSLVANFPHLPTEHNLPRKVDLFNKT WQADAFPEFYQALLTDGAGGQLRQQLYSRQMALQLAEENSVAQVRSYSDELTQRPDPLSAAMEYDFNHWMQEAQMVKVDI ASMANSLEVRVPFLDKQVVGLGSSLPARFKLHAGKEKYLLHCLAKRYLPDYIVNRKKQELAVPLEQWMVSSMKTRIIDTL TSEQALSRGYFNPDRLRQFVREFDAGHSYALWTMYMLEKWHQQFVDNQES
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=399, Percent_Identity=28.3208020050125, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI168229252, Length=399, Percent_Identity=28.3208020050125, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI168229250, Length=399, Percent_Identity=28.3208020050125, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI296010848, Length=368, Percent_Identity=28.804347826087, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI296010852, Length=299, Percent_Identity=28.7625418060201, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI296010850, Length=299, Percent_Identity=28.7625418060201, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1786889, Length=408, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=6e-47, Organism=Caenorhabditis elegans, GI25147557, Length=383, Percent_Identity=29.5039164490862, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71993933, Length=383, Percent_Identity=29.5039164490862, Blast_Score=136, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17560178, Length=405, Percent_Identity=29.6296296296296, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25147560, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325403, Length=438, Percent_Identity=30.365296803653, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321563, Length=437, Percent_Identity=31.1212814645309, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI45553209, Length=395, Percent_Identity=31.3924050632911, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 69261; Mature: 69261
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIAGVINFHRQPAQPPLLASMLAALTHRGPDQEGTYHQGHVSIGMRRLKIIALDNGAQ CCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCHHHCCEEEEEEEEECCCCC PCYSNDGRYVLVFNGEIYNYRALRAELIAQGFRFDTESDAEVIVNLYQRDGEAFYQRLDG CCCCCCCCEEEEECCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHCC MFALAIYDRISDTLLLARDPAGKKPLFYALRDGVVSFSSELNSLLKDQSIPRRIDPVALD HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE YYLRFRVVPGDRCIFQGISKVPAGGGVSFTLGQESRQHYWRVAYRPTEDDKPLEQWVDEI EEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCHHHCCEEEEEECCCCCCCHHHHHHHHH DEYLNQAIAKRLMAEVPIGTMLSGGLDSSLITAIACRQGRRELKTFAVGFNESAFSELDY HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SRRLAKDLGTEHHDYIITPQEAFDAAHGLVSHFGEPFAFPSSIASHFMYRLARQHVTVVL HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEE GGDGADELFGGYARYSLVANFPHLPTEHNLPRKVDLFNKTWQADAFPEFYQALLTDGAGG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHCCCCCH QLRQQLYSRQMALQLAEENSVAQVRSYSDELTQRPDPLSAAMEYDFNHWMQEAQMVKVDI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASMANSLEVRVPFLDKQVVGLGSSLPARFKLHAGKEKYLLHCLAKRYLPDYIVNRKKQEL HHHHCCCEEEECCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHCCCHHHH AVPLEQWMVSSMKTRIIDTLTSEQALSRGYFNPDRLRQFVREFDAGHSYALWTMYMLEKW HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH HQQFVDNQES HHHHCCCCCC >Mature Secondary Structure MCGIAGVINFHRQPAQPPLLASMLAALTHRGPDQEGTYHQGHVSIGMRRLKIIALDNGAQ CCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCHHHCCEEEEEEEEECCCCC PCYSNDGRYVLVFNGEIYNYRALRAELIAQGFRFDTESDAEVIVNLYQRDGEAFYQRLDG CCCCCCCCEEEEECCCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHCC MFALAIYDRISDTLLLARDPAGKKPLFYALRDGVVSFSSELNSLLKDQSIPRRIDPVALD HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE YYLRFRVVPGDRCIFQGISKVPAGGGVSFTLGQESRQHYWRVAYRPTEDDKPLEQWVDEI EEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCHHHCCEEEEEECCCCCCCHHHHHHHHH DEYLNQAIAKRLMAEVPIGTMLSGGLDSSLITAIACRQGRRELKTFAVGFNESAFSELDY HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SRRLAKDLGTEHHDYIITPQEAFDAAHGLVSHFGEPFAFPSSIASHFMYRLARQHVTVVL HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEE GGDGADELFGGYARYSLVANFPHLPTEHNLPRKVDLFNKTWQADAFPEFYQALLTDGAGG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHCCCCCH QLRQQLYSRQMALQLAEENSVAQVRSYSDELTQRPDPLSAAMEYDFNHWMQEAQMVKVDI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASMANSLEVRVPFLDKQVVGLGSSLPARFKLHAGKEKYLLHCLAKRYLPDYIVNRKKQEL HHHHCCCEEEECCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHCCCHHHH AVPLEQWMVSSMKTRIIDTLTSEQALSRGYFNPDRLRQFVREFDAGHSYALWTMYMLEKW HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH HQQFVDNQES HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]