| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is bacC [H]
Identifier: 157368591
GI number: 157368591
Start: 392916
End: 394655
Strand: Direct
Name: bacC [H]
Synonym: Spro_0342
Alternate gene names: 157368591
Gene position: 392916-394655 (Clockwise)
Preceding gene: 157368590
Following gene: 157368592
Centisome position: 7.21
GC content: 58.22
Gene sequence:
>1740_bases ATGCCCATCGTTGAGGTTTTCAATCCGCCGTCCCTGAACTCGCGTCTTGATATGACGGCCCGGCGTTACGCCACTCGTTT GGCTGTGCAGGATGAGACGAGAGCGCTGACGTTCGCCGAGTTTTCTGATGAGGTTGGCACCCTGGCTGCAAGGTTGCAGC TGGTGCTTGAGCCCGGCGATCACGTGGCGGTGCAACTGCCGCGCGGGTTGGATTATATCGTTGCCGCCTATGCGATCTGG CAGGCAGGCGGGGTTTATTTGCCGCTGGACGATCAATGGCCATCGTCGCGCATTGAGGGGATCTTGCATCGTTCGCACGT GCGGGTACTGATCCATGCGCCGCAGGCGGGACATGGCATAGCGCTGACCGAGTTGGCCGCAGAACCGCGGGCCGAACTGC CGGCGGCCGGCACGCCCGCTTATATCATTCATACCTCCGGCACCACCGGCGAGCCAAAAGGCGTGGTGGTCAGCCAAGAA TCGCTGCTGCATTTGGTGGACAGCCATCAGCGTGATATTTATCAGATACATGGCGTCACCGAAGGGCCTGTGGTTATCAA TGCTTCCTTCTGTTTCGACAGCGCGCTGGAGCGTATGGCGTTGGTTGCCTTGGGCTACAGCGTACAGGTTGTCAGCGATC GGGTGAGAAAATCGCCGCATGAGCTGGTGGGATACCTATGCGACCACCATATTGTCAATGTGGACTTGGTGCCTTCTCAT CTGAAAGTGCTGCTCAGCGCCGGCCTCAATGAGAAGTGTGACGCGCTGCGGCTGGTGATTGTCGGCGGTGAGGCGATTGA CGTCGAACTCTGGCGCCAGCTTGCCGCCAACGAGGCCGTTTACATCAACGTATACGGCCCTACCGAGAACACCATCAACA CCAGCTTTTGTGAAATCCGTGGCGAAATGCCGCACATCGGCCGCCCGTTTGAAAATGTGTCATGTCTGATCCTGGATGAG GGTGGACAGCGTTGCCCACCGGGCGAGGACGGTGAACTGCTGGTGGCCGGCCGCCATCTTGCGCTGGGGTATTACAATGC GCCAGCGCTTACCGCCCGAGCCTTTGTCAACGTCGATGGCCTCCGCTACTACCGCACAGGCGATCGGGTGAGGCAGAACG AACAGGGAAATCTGCTGTTTCTCGGCCGTATTGACGATCAGGTAAAAATCAACGGATTCCGCATTGAACTTGCCGATGTG CAGCACAATCTGGCGCAATTGCCCGGCGTGCAATATGCCGCCGTGACGCCGATCAAACTACCGTCAGGGCAGGGATTGCT GGCCTCCGTCGTCTGGCATGCCGATACCGCCGGACAAACGCTCGCCAGCCTTGAAACCTTGCTTGGCGAGAAATTGCCGG CCTATATGGTGCCGGATCGCTGGCAGCAGCTTGACGCCTTGCCACTGACCGACAATTTGAAGCTTGACCACAAATCGCTG CTGAGCTATTGGCAACGCCGTCAGGAGCAGGCCGATGAGCCTGTTGTCGGCGAGTCGCTTTCTGCGACCGAACGTCAGAT TCAAACCCTTTGGCAGCGTATCCTGATGCGGACATCCTTGTCCCCGGATGCTCACTTCTTCGCTTCAGGCGGGGATTCCA TGGCAGCCATGACGCTGCTGGTCGAATTGAAGAAGGTGACACCACACGAGGTGGGGTTGGGGGACATTTTCAAATATCCG ACGATTCGCAAAATGGCCGCTTGGTTGGATGAGTCCTCCGTGCATGCGGAGGGCGAATAA
Upstream 100 bases:
>100_bases AACATTTTGGTCAGCCACGGCCGCAAGCCTTTTGAAGGGGAGCGGGCGGTGCGCGTTGCCCTGATCGACCCGATTTATCC TTCAGCAGAGGAGAATTCTT
Downstream 100 bases:
>100_bases TGTGCCTGATCTTTTGTCTGCCGCATGCCGGCGGCGGAGCTCATCACTATTTTGGCTGGGCGGCGCACCTTGCCCCTGAC ATTCAATGGGAGCCGCTTGA
Product: amino acid adenylation domain-containing protein
Products: NA
Alternate protein names: BA3; ATP-dependent isoleucine adenylase; IleA; Isoleucine activase; ATP-dependent D-phenylalanine adenylase; D-PheA; D-phenylalanine activase; ATP-dependent histidine adenylase; HisA; Histidine activase; ATP-dependent D-aspartate adenylase; D-AspA; D-aspartate activase; ATP-dependent asparagine adenylase; AsnA; Asparagine activase; Aspartate racemase; Phenylalanine racemase [ATP hydrolyzing] [H]
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MPIVEVFNPPSLNSRLDMTARRYATRLAVQDETRALTFAEFSDEVGTLAARLQLVLEPGDHVAVQLPRGLDYIVAAYAIW QAGGVYLPLDDQWPSSRIEGILHRSHVRVLIHAPQAGHGIALTELAAEPRAELPAAGTPAYIIHTSGTTGEPKGVVVSQE SLLHLVDSHQRDIYQIHGVTEGPVVINASFCFDSALERMALVALGYSVQVVSDRVRKSPHELVGYLCDHHIVNVDLVPSH LKVLLSAGLNEKCDALRLVIVGGEAIDVELWRQLAANEAVYINVYGPTENTINTSFCEIRGEMPHIGRPFENVSCLILDE GGQRCPPGEDGELLVAGRHLALGYYNAPALTARAFVNVDGLRYYRTGDRVRQNEQGNLLFLGRIDDQVKINGFRIELADV QHNLAQLPGVQYAAVTPIKLPSGQGLLASVVWHADTAGQTLASLETLLGEKLPAYMVPDRWQQLDALPLTDNLKLDHKSL LSYWQRRQEQADEPVVGESLSATERQIQTLWQRILMRTSLSPDAHFFASGGDSMAAMTLLVELKKVTPHEVGLGDIFKYP TIRKMAAWLDESSVHAEGE
Sequences:
>Translated_579_residues MPIVEVFNPPSLNSRLDMTARRYATRLAVQDETRALTFAEFSDEVGTLAARLQLVLEPGDHVAVQLPRGLDYIVAAYAIW QAGGVYLPLDDQWPSSRIEGILHRSHVRVLIHAPQAGHGIALTELAAEPRAELPAAGTPAYIIHTSGTTGEPKGVVVSQE SLLHLVDSHQRDIYQIHGVTEGPVVINASFCFDSALERMALVALGYSVQVVSDRVRKSPHELVGYLCDHHIVNVDLVPSH LKVLLSAGLNEKCDALRLVIVGGEAIDVELWRQLAANEAVYINVYGPTENTINTSFCEIRGEMPHIGRPFENVSCLILDE GGQRCPPGEDGELLVAGRHLALGYYNAPALTARAFVNVDGLRYYRTGDRVRQNEQGNLLFLGRIDDQVKINGFRIELADV QHNLAQLPGVQYAAVTPIKLPSGQGLLASVVWHADTAGQTLASLETLLGEKLPAYMVPDRWQQLDALPLTDNLKLDHKSL LSYWQRRQEQADEPVVGESLSATERQIQTLWQRILMRTSLSPDAHFFASGGDSMAAMTLLVELKKVTPHEVGLGDIFKYP TIRKMAAWLDESSVHAEGE >Mature_578_residues PIVEVFNPPSLNSRLDMTARRYATRLAVQDETRALTFAEFSDEVGTLAARLQLVLEPGDHVAVQLPRGLDYIVAAYAIWQ AGGVYLPLDDQWPSSRIEGILHRSHVRVLIHAPQAGHGIALTELAAEPRAELPAAGTPAYIIHTSGTTGEPKGVVVSQES LLHLVDSHQRDIYQIHGVTEGPVVINASFCFDSALERMALVALGYSVQVVSDRVRKSPHELVGYLCDHHIVNVDLVPSHL KVLLSAGLNEKCDALRLVIVGGEAIDVELWRQLAANEAVYINVYGPTENTINTSFCEIRGEMPHIGRPFENVSCLILDEG GQRCPPGEDGELLVAGRHLALGYYNAPALTARAFVNVDGLRYYRTGDRVRQNEQGNLLFLGRIDDQVKINGFRIELADVQ HNLAQLPGVQYAAVTPIKLPSGQGLLASVVWHADTAGQTLASLETLLGEKLPAYMVPDRWQQLDALPLTDNLKLDHKSLL SYWQRRQEQADEPVVGESLSATERQIQTLWQRILMRTSLSPDAHFFASGGDSMAAMTLLVELKKVTPHEVGLGDIFKYPT IRKMAAWLDESSVHAEGE
Specific function: Induces peptide synthesis, activates and incorporates five amino acids, forms a thiazoline ring between the first two amino acids and incoporates a D-glutamine in the fourth position [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=485, Percent_Identity=28.0412371134021, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI38505220, Length=401, Percent_Identity=24.9376558603491, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1786801, Length=582, Percent_Identity=31.2714776632302, Blast_Score=196, Evalue=4e-51, Organism=Escherichia coli, GI1788107, Length=549, Percent_Identity=23.1329690346084, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI145693145, Length=542, Percent_Identity=23.4317343173432, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1786810, Length=518, Percent_Identity=25.0965250965251, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17556356, Length=533, Percent_Identity=25.328330206379, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17550940, Length=589, Percent_Identity=22.4108658743633, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI32564420, Length=491, Percent_Identity=24.0325865580448, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564422, Length=491, Percent_Identity=24.0325865580448, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319591, Length=658, Percent_Identity=24.6200607902736, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6319699, Length=392, Percent_Identity=22.1938775510204, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648676, Length=578, Percent_Identity=29.0657439446367, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI19922652, Length=375, Percent_Identity=25.6, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: =5.1.1.13; =5.1.1.11 [H]
Molecular weight: Translated: 63677; Mature: 63546
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVEVFNPPSLNSRLDMTARRYATRLAVQDETRALTFAEFSDEVGTLAARLQLVLEPGD CCEEEECCCCCCCCCHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHEEEEEECCCC HVAVQLPRGLDYIVAAYAIWQAGGVYLPLDDQWPSSRIEGILHRSHVRVLIHAPQAGHGI EEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCE ALTELAAEPRAELPAAGTPAYIIHTSGTTGEPKGVVVSQESLLHLVDSHQRDIYQIHGVT EEEHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEECCC EGPVVINASFCFDSALERMALVALGYSVQVVSDRVRKSPHELVGYLCDHHIVNVDLVPSH CCCEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHCCEEEEEEECHHH LKVLLSAGLNEKCDALRLVIVGGEAIDVELWRQLAANEAVYINVYGPTENTINTSFCEIR HHHHHHCCCCCCCCEEEEEEECCCEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEC GEMPHIGRPFENVSCLILDEGGQRCPPGEDGELLVAGRHLALGYYNAPALTARAFVNVDG CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECC LRYYRTGDRVRQNEQGNLLFLGRIDDQVKINGFRIELADVQHNLAQLPGVQYAAVTPIKL EEEEECCCHHCCCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEEEEC PSGQGLLASVVWHADTAGQTLASLETLLGEKLPAYMVPDRWQQLDALPLTDNLKLDHKSL CCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH LSYWQRRQEQADEPVVGESLSATERQIQTLWQRILMRTSLSPDAHFFASGGDSMAAMTLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH VELKKVTPHEVGLGDIFKYPTIRKMAAWLDESSVHAEGE HHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PIVEVFNPPSLNSRLDMTARRYATRLAVQDETRALTFAEFSDEVGTLAARLQLVLEPGD CEEEECCCCCCCCCHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHEEEEEECCCC HVAVQLPRGLDYIVAAYAIWQAGGVYLPLDDQWPSSRIEGILHRSHVRVLIHAPQAGHGI EEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCE ALTELAAEPRAELPAAGTPAYIIHTSGTTGEPKGVVVSQESLLHLVDSHQRDIYQIHGVT EEEHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEECCC EGPVVINASFCFDSALERMALVALGYSVQVVSDRVRKSPHELVGYLCDHHIVNVDLVPSH CCCEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHCCEEEEEEECHHH LKVLLSAGLNEKCDALRLVIVGGEAIDVELWRQLAANEAVYINVYGPTENTINTSFCEIR HHHHHHCCCCCCCCEEEEEEECCCEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEC GEMPHIGRPFENVSCLILDEGGQRCPPGEDGELLVAGRHLALGYYNAPALTARAFVNVDG CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECC LRYYRTGDRVRQNEQGNLLFLGRIDDQVKINGFRIELADVQHNLAQLPGVQYAAVTPIKL EEEEECCCHHCCCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEEEEC PSGQGLLASVVWHADTAGQTLASLETLLGEKLPAYMVPDRWQQLDALPLTDNLKLDHKSL CCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH LSYWQRRQEQADEPVVGESLSATERQIQTLWQRILMRTSLSPDAHFFASGGDSMAAMTLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH VELKKVTPHEVGLGDIFKYPTIRKMAAWLDESSVHAEGE HHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9427658 [H]