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The map label for this gene is ocd [H]

Identifier: 157368589

GI number: 157368589

Start: 390902

End: 391936

Strand: Direct

Name: ocd [H]

Synonym: Spro_0340

Alternate gene names: 157368589

Gene position: 390902-391936 (Clockwise)

Preceding gene: 157368588

Following gene: 157368590

Centisome position: 7.17

GC content: 53.82

Gene sequence:

>1035_bases
ATGTCTGACGGACAGGTAGATTTTGAGGTCATCACAGGCGATTATATCAACAAGGTCATTGCCACGTCCCGCCGGGACAT
TATCGATCTGGTTCGCCAAAGTTACCTGACCCATCATCAGGGAAAAACCGAGAATCCAGACAGCTATTTTTTGCGTTTTA
AAAACAAACCGGAAGCCAGAATCATTGCTCTGCCAGCGGCCATCGACAACCCCGAGGCTGACACTTCCGTTTCCGGCATC
AAATGGATCGCCAGCTATCCGCGCAATATCGAAGCCAACCTGCAGCGCGCATCGGCGGTTATTTTGTTGAACGATTATGA
GACGGGATATCCGTTCTCATGCCTGGAGGCATCGCAAATCAGCGCGGCGCGTACTGCCGCTTCTGCGGTACTGGCGGCCA
ATCACCTTGGGCCAGCCGGCAAAAACGCCAAGCGTTTGTCCATCATCGGCGGCGGTCTGATCGCCAGAACCATTCTGGCC
TTTTTCAAGGATGAGGGGTGGCGTTTCGATGACGTTGTGATCCATGACATTTCTGCCGAATATCGCGATGCATTTATCAA
AAACACCAACCTGCAAGAGGTGTATCAGGTGCGGGCGGCGGTCGATCAAGCGGAAGCGCTGGCCGCGGACATTGTCGTTT
TCGCCACCACGGCGGCGTCGCCGCATGTCATGGATGAGCGGACCTTCGCGCCTCATCAATTGGTGCTCAATATTTCCTTG
CGCGATGTGTCTCCGGAGATCGTTCACGCTGGCAACAACGTGCTGGACGATGTTGAACATTGCATGAAGGCCAACACCTC
ACCTCACCTTGCCGAGCAAAAATATGGCCACCGCTGCTTTATCAACGGCACCCTGGCGCAAGTCATCAACGGTGAGATAA
CGCTCGATAAAACCAAAGCCACTCTCTTTTCTCCCTTTGGTCTGGGCGTGCTCGATCTGAGCTTGGCCATGTTTATTTAC
CGCTGTAATCGCGTAGCACCCGGCAGGCATATCATCCCCGATTTCTTCCCCGACACGCAGCGCTGGAGCCTTTAA

Upstream 100 bases:

>100_bases
GGTTACGTAGACACTGTTTACAACGACGAATGGTGCGATCGCACCTTTGGCGCCAGTTGGAAAATGGCGGAAAAAAGCAT
CGACATGAAAGGAACGGAAT

Downstream 100 bases:

>100_bases
TCGATGAGCCACTCTTATACCGTCCGCCCGTTGGTCAACGGCGTTCCGCACGTCTCTCTGGTGACTGCTTCCAACGGTAA
CGTTTCTATCGCCGAATTTT

Product: ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSDGQVDFEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRFKNKPEARIIALPAAIDNPEADTSVSGI
KWIASYPRNIEANLQRASAVILLNDYETGYPFSCLEASQISAARTAASAVLAANHLGPAGKNAKRLSIIGGGLIARTILA
FFKDEGWRFDDVVIHDISAEYRDAFIKNTNLQEVYQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNISL
RDVSPEIVHAGNNVLDDVEHCMKANTSPHLAEQKYGHRCFINGTLAQVINGEITLDKTKATLFSPFGLGVLDLSLAMFIY
RCNRVAPGRHIIPDFFPDTQRWSL

Sequences:

>Translated_344_residues
MSDGQVDFEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRFKNKPEARIIALPAAIDNPEADTSVSGI
KWIASYPRNIEANLQRASAVILLNDYETGYPFSCLEASQISAARTAASAVLAANHLGPAGKNAKRLSIIGGGLIARTILA
FFKDEGWRFDDVVIHDISAEYRDAFIKNTNLQEVYQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNISL
RDVSPEIVHAGNNVLDDVEHCMKANTSPHLAEQKYGHRCFINGTLAQVINGEITLDKTKATLFSPFGLGVLDLSLAMFIY
RCNRVAPGRHIIPDFFPDTQRWSL
>Mature_343_residues
SDGQVDFEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRFKNKPEARIIALPAAIDNPEADTSVSGIK
WIASYPRNIEANLQRASAVILLNDYETGYPFSCLEASQISAARTAASAVLAANHLGPAGKNAKRLSIIGGGLIARTILAF
FKDEGWRFDDVVIHDISAEYRDAFIKNTNLQEVYQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNISLR
DVSPEIVHAGNNVLDDVEHCMKANTSPHLAEQKYGHRCFINGTLAQVINGEITLDKTKATLFSPFGLGVLDLSLAMFIYR
CNRVAPGRHIIPDFFPDTQRWSL

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 37995; Mature: 37864

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGQVDFEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRFKNKPEAR
CCCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
IIALPAAIDNPEADTSVSGIKWIASYPRNIEANLQRASAVILLNDYETGYPFSCLEASQI
EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECEEEEEEECCCCCCCCCCCCHHHH
SAARTAASAVLAANHLGPAGKNAKRLSIIGGGLIARTILAFFKDEGWRFDDVVIHDISAE
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEECCEEEEECCHH
YRDAFIKNTNLQEVYQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNISL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
RDVSPEIVHAGNNVLDDVEHCMKANTSPHLAEQKYGHRCFINGTLAQVINGEITLDKTKA
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCHHHHHHCCCEEEECCHH
TLFSPFGLGVLDLSLAMFIYRCNRVAPGRHIIPDFFPDTQRWSL
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDGQVDFEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRFKNKPEAR
CCCCEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
IIALPAAIDNPEADTSVSGIKWIASYPRNIEANLQRASAVILLNDYETGYPFSCLEASQI
EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECEEEEEEECCCCCCCCCCCCHHHH
SAARTAASAVLAANHLGPAGKNAKRLSIIGGGLIARTILAFFKDEGWRFDDVVIHDISAE
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEECCEEEEECCHH
YRDAFIKNTNLQEVYQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNISL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
RDVSPEIVHAGNNVLDDVEHCMKANTSPHLAEQKYGHRCFINGTLAQVINGEITLDKTKA
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCHHHHHHCCCEEEECCHH
TLFSPFGLGVLDLSLAMFIYRCNRVAPGRHIIPDFFPDTQRWSL
EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7873778 [H]