Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is metE
Identifier: 157368491
GI number: 157368491
Start: 270822
End: 273098
Strand: Direct
Name: metE
Synonym: Spro_0242
Alternate gene names: 157368491
Gene position: 270822-273098 (Clockwise)
Preceding gene: 157368489
Following gene: 157368493
Centisome position: 4.97
GC content: 58.06
Gene sequence:
>2277_bases ATGGCAATTCTAAATCACACACTGGGTTTTCCTCGCGTTGGGCTACGACGTGAACTGAAAAAAGCTCAGGAAAGCTACTG GGCAGGTAACTCAACGCAGGAAGAACTGTTGGCAGTTGGCCGCGAGCTGCGCGCTCGCCATTGGCAACAGCAACAACAGG CCGGGGTGGATTTGGTGCCGGTCGGCGATTTCGCCTGGTACGACCATGTCTTGACCACCAGTCTGCTGCTCGGCAACGTG CCGGCGCGTCATCAAAATGCGGACGGCACAATCGATCTCGATACGTTGTTCCGCCTGGGCCGTGGCCGCGCACCGACCGG TGAACCGGCAGCAGCGGCGGAAATGACCAAATGGTTTAACACCAACTACCACTACATGGTGCCCGAATTCCATAAGGGCC AGCAGTTCAAACTGGGCTGGAGCCAATTGCTGGACGAAGTTGACGAAGCGCTGGCGCTGGGCCACAAAATCAAACCCGTG CTGTTGGGGCCGGTCACATACCTGTGGCTGGGCAAAGTGAAGGGTGAGCCGTTTGACCGCCTGTCGCTGCTCAACGATAT CCTGCCGGTTTATCAGCAGGTGCTGGCCGAGCTGGCGAAACGCGGCGTTGAATGGGTGCAGATCGACGAGCCTGCGCTGG TGCTGGAATTGCCGCAGGCGTGGCTGAACGCCTTCAAACCGGCTTATGACGCGCTGCAGGGCCAGGTAAAACTGCTGCTG ACTACCTATTTCGACAGCGTTGGCCACAATCTTGACACCCTCCGTGAGTTACCGGTGCAGGGGCTGCACGTTGACCTGGT TGGCGGTCACGACGATATCGCGGTATTGAATAAGGCGCTGCCGAAAGAGTGGCTGCTGTCACTGGGGGTAATCAACGGTC GCAACGTCTGGCGCGCCGATCTGAGCAATTGGTTCGAACGTTTGCAGCCATTAGTGGGCAGTCGCCCGCTGTGGATCGGC ACTTCCTGTTCACTGTTGCACAGCCCGATCGATCTGAGTGTGGAAACCCGGCTGGACGAAGAAGTGAAGAGTTGGTTCGC CTTCGCCCTGCAAAAATGCGGCGAACTGGCGTTGCTGAGTGCGGCGTTGAACGCACCGGGCGCAGCAAAACAGGCTGAAC TGGACGCCTACAGCGCGCCAATCCGTGCCCGTCGTCAGTCCAGCCGTGTGCATAATGCGCAGGTCGGTCAACGCCTGGCT GCTATTACCGCGCAGGACAGCGAACGTCAGCGTCCTTACGCCGAGCGTGCTCAGGCACAGCGTGAACGCTTTAACCTGCC GGCCTGGCCGACCACTACCATAGGTTCATTCCCGCAAACCACCGAAATTCGCGGCCTGCGTCTGGACTTCAAGCAGGGGC GTTTGGACGGCAACAACTACCGCACCAGCATTAGCGAGCACATCAAACAGGCGATCGTTGAGCAAGAACGTCTGGGCCTG GACGTATTGGTACACGGTGAAGCCGAGCGTAACGACATGGTCGAATACTTCGGTGAGAACCTCGACGGCTTCGTTTTCAC CCAAAACGGCTGGGTACAGAGCTACGGTTCCCGCTGCGTAAAACCGCCGGTGATCATCGGCGATATCAGCCGACCGGAAG CCATCACCGTAGAGTGGGCGAAGTATGCTCAGTCGCTGACCGACAAGCCGGTGAAGGGCATGTTGACCGGCCCGGTAACC ATTCTTTGCTGGTCATTCCCGCGTGAAGACGTGACCCGTGAAGTGATTGCCAAACAAATCGCCCTGGCGCTGCGTGATGA AGTGGAAGATCTGGAAAAAGCCGGCATTGGCATCATCCAGATTGACGAACCGGCACTGCGTGAAGGTCTGCCGCTGCGTC AATCCGACTGGGCTGCCTACCTGAATTGGGCGGTGGACGCGTTCAAATTGAATGCCGCCGTGGCGAAGGATGATACTCAG ATCCACACCCACATGTGTTACTGCGAGTTCAACGACATCATGGATTCGATTGCAGCGCTGGATGCTGACGTGATCACCAT CGAAACCTCGCGTTCCGATATGGATTTGCTGGAAGCCTTTAAAGAGTTTGAATACCCGAACGAAATCGGTCCGGGTGTGT ATGACATCCACTCGCCAAACGTGCCAAGCGTTGAATGGATCGAAGCGCTGCTGCGTAAAGCCGCGCAGAACATCCCGGCA GAACGCCTGTGGGTTAACCCGGACTGCGGCCTGAAAACCCGCGGCTGGCCGGAAACCCGTCAGTCGCTGGCCAACATGGT GCTGGCTGCACAACGCCTGCGCGAGCAGCAGGCCTGA
Upstream 100 bases:
>100_bases TCCTTCACAGTGACAGTGAATAAATTGCGCTTGTGGTTAATACAGTACCTGCGGATTATGGATGTGTAAACATCTGGACG GCTAAATGGGGAATATGACG
Downstream 100 bases:
>100_bases TTGTCGCCGTGGTGCAATGATGTTTTGATCTGACAACCTGGGCGCTTCGGCGCCCTTTTTTATGTCGCAGGCGGCTGTCT GGTCAGGCAGCCGTGAGGTG
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MAILNHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNV PARHQNADGTIDLDTLFRLGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPV LLGPVTYLWLGKVKGEPFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQVKLLL TTYFDSVGHNLDTLRELPVQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRADLSNWFERLQPLVGSRPLWIG TSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLSAALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLA AITAQDSERQRPYAERAQAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGL DVLVHGEAERNDMVEYFGENLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTDKPVKGMLTGPVT ILCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQ IHTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPA ERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA
Sequences:
>Translated_758_residues MAILNHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNV PARHQNADGTIDLDTLFRLGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPV LLGPVTYLWLGKVKGEPFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQVKLLL TTYFDSVGHNLDTLRELPVQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRADLSNWFERLQPLVGSRPLWIG TSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLSAALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLA AITAQDSERQRPYAERAQAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGL DVLVHGEAERNDMVEYFGENLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTDKPVKGMLTGPVT ILCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQ IHTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPA ERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA >Mature_757_residues AILNHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVPVGDFAWYDHVLTTSLLLGNVP ARHQNADGTIDLDTLFRLGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPVL LGPVTYLWLGKVKGEPFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQVKLLLT TYFDSVGHNLDTLRELPVQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRADLSNWFERLQPLVGSRPLWIGT SCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLSAALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLAA ITAQDSERQRPYAERAQAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGLD VLVHGEAERNDMVEYFGENLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTDKPVKGMLTGPVTI LCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQI HTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPAE RLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family
Homologues:
Organism=Escherichia coli, GI2367304, Length=754, Percent_Identity=84.7480106100796, Blast_Score=1325, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=765, Percent_Identity=48.1045751633987, Blast_Score=709, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METE_SERP5 (A8G8B2)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476480.1 - ProteinModelPortal: A8G8B2 - SMR: A8G8B2 - STRING: A8G8B2 - GeneID: 5606482 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0242 - eggNOG: COG0620 - HOGENOM: HBG287495 - OMA: RFGWVQS - ProtClustDB: PRK05222 - BioCyc: SPRO399741:SPRO_0242-MONOMER - HAMAP: MF_00172 - InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 - PIRSF: PIRSF000382 - TIGRFAMs: TIGR01371
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2
EC number: =2.1.1.14
Molecular weight: Translated: 85121; Mature: 84990
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILNHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE VGDFAWYDHVLTTSLLLGNVPARHQNADGTIDLDTLFRLGRGRAPTGEPAAAAEMTKWFN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHC TNYHYMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPVLLGPVTYLWLGKVKGEPFDR CCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCHHH LSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQVKLLL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH TTYFDSVGHNLDTLRELPVQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRAD HHHHHHHCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHH LSNWFERLQPLVGSRPLWIGTSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLS HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH AALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLAAITAQDSERQRPYAERAQAQ HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH RERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGL HHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DVLVHGEAERNDMVEYFGENLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWA EEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCEEEECCCCCCEEEEHHH KYAQSLTDKPVKGMLTGPVTILCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQ HHHHHHCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQIHTHMCYCEFNDIMDSIAAL ECCHHHHCCCCCCCCHHHHHHHHHHHHHEECHHHCCCCCEEEEEEEEEEHHHHHHHHHHC DADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPA CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCH ERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA HHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AILNHTLGFPRVGLRRELKKAQESYWAGNSTQEELLAVGRELRARHWQQQQQAGVDLVP CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE VGDFAWYDHVLTTSLLLGNVPARHQNADGTIDLDTLFRLGRGRAPTGEPAAAAEMTKWFN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHC TNYHYMVPEFHKGQQFKLGWSQLLDEVDEALALGHKIKPVLLGPVTYLWLGKVKGEPFDR CCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCHHH LSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAYDALQGQVKLLL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH TTYFDSVGHNLDTLRELPVQGLHVDLVGGHDDIAVLNKALPKEWLLSLGVINGRNVWRAD HHHHHHHCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHH LSNWFERLQPLVGSRPLWIGTSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLS HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH AALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLAAITAQDSERQRPYAERAQAQ HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH RERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGL HHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DVLVHGEAERNDMVEYFGENLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWA EEEEECCCCHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCEEEECCCCCCEEEEHHH KYAQSLTDKPVKGMLTGPVTILCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQ HHHHHHCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQIHTHMCYCEFNDIMDSIAAL ECCHHHHCCCCCCCCHHHHHHHHHHHHHEECHHHCCCCCEEEEEEEEEEHHHHHHHHHHC DADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPA CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCH ERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA HHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA