Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is gpmB [H]
Identifier: 157163843
GI number: 157163843
Start: 4635683
End: 4636330
Strand: Direct
Name: gpmB [H]
Synonym: EcHS_A4631
Alternate gene names: 157163843
Gene position: 4635683-4636330 (Clockwise)
Preceding gene: 157163841
Following gene: 157163845
Centisome position: 99.83
GC content: 56.02
Gene sequence:
>648_bases ATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCC GCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCAACCCGTGCCAAAGAGCTTGGCATTACGCATATTATCAGTA GCGATTTAGGACGCACCCGGCGTACGGCGGAAATCATCGCCCAGGCCTGCGGCTGTGACATCATCTTTGATTCTCGCCTG CGTGAATTAAACATGGGTGTGCTGGAAAAAAGACATATCGATTCTCTGACCGAAGAAGAAGAGAACTGGCGTCGGCAGCT GGTCAATGGCACCGTTGACGGGCGTATTCCTGAAGGCGAGTCAATGCAGGAGCTCAGCGATCGCGTCAATGCGGCACTGG AATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGCCATGGTATTGCACTGGGATGTCTGGTGAGTACG ATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAG CCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGC AGCGTTAA
Upstream 100 bases:
>100_bases TGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACA GCAGTATACGGAAAAAAAGC
Downstream 100 bases:
>100_bases CGGCGGATAGGAATCAGCAGTTCACAGCGCAGATTAATTGGGCGATCTCCCGCTTTGGCGTCTTCTGCCGGGTAGTATCG CTCAATATCCTGACCTTTAC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRL RELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR
Sequences:
>Translated_215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRL RELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR >Mature_215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRL RELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=215, Percent_Identity=100, Blast_Score=434, Evalue=1e-123, Organism=Escherichia coli, GI1786857, Length=187, Percent_Identity=26.7379679144385, Blast_Score=76, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324857, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=6e-12, Organism=Drosophila melanogaster, GI28571815, Length=206, Percent_Identity=30.5825242718447, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28571817, Length=206, Percent_Identity=30.5825242718447, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24648979, Length=206, Percent_Identity=30.5825242718447, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24066; Mature: 24066
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR CEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGE HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS CHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RVDYQESLWLASGWVVETAGDISHLDAPALDELQR CCCHHHHHHHHCCEEEECCCCHHHCCCCCHHHHCC >Mature Secondary Structure MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR CEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGE HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS CHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RVDYQESLWLASGWVVETAGDISHLDAPALDELQR CCCHHHHHHHHCCEEEECCCCHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA