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The map label for this gene is smp

Identifier: 157163834

GI number: 157163834

Start: 4626136

End: 4626780

Strand: Reverse

Name: smp

Synonym: EcHS_A4622

Alternate gene names: 157163834

Gene position: 4626780-4626136 (Counterclockwise)

Preceding gene: 157163839

Following gene: 157163833

Centisome position: 99.64

GC content: 55.97

Gene sequence:

>645_bases
ATGGCTCGCACAAAACTGAAATTCCGGCTGCATCGGGCAGTGATTGTCCTGTTCTGTCTTGCCTTGTTAGTGGCACTGAT
GCAGGGGGCGTCATGGTTTAGTCAAAACCACCAGCGACAGCGTAATCCACAGCTGGAAGAACTGGCCCGCACCCTGGCGC
GTCAGGTGACGCTGAACGTTGCACCGCTGATGCGTACCGACTCACCAGATGAAAAACGCATTCAGGCGATCCTCGATCAG
TTAACGGATGAAAGCCGCATCCTCGACGCGGGTGTGTATGACGAACAAGGCGATCTTATCGCCCGTTCAGGCGAAAGCGT
CGAAGTGCGCGACCGGCTGGCGCTCGACGGTAAAAAAGCGGGCGGCTATTTTAACCAGCAGATTGTCGAACCAATTGCCG
GGAAAAACGGACCGCTCGGCTATCTGCGCCTGACGCTCGACACCCATACGCTCGCCACCGAAGCCCAACAGGTGGATAAC
ACCACTAACATTTTACGCCTGATGTTGCTGCTTTCACTGGCAATCGGCGTAGTGCTGACCCGCACGCTGCTACAGGGTAA
ACGTACCCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCCAGCAAACCGGTGCCGGAAGAGGAAGAAAGCGAGAAAAAAG
AGTGA

Upstream 100 bases:

>100_bases
CTCCTGTAAAATCGTTCGAAGCAGGGAAAATAACGCATGAGGCTACCTTGTATCCATTGCTTCTGGCAACATTAAGTCTC
AAATTTTCAAAGGGTGGAAG

Downstream 100 bases:

>100_bases
CCCATTACTACAAGAAAGGAAATCGTTATGTCCACATTACGCCTGCTCATCTCTGACTCTTACGACCCGTGGTTTAACCT
GGCGGTGGAGGAGTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQ
LTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE

Sequences:

>Translated_214_residues
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQ
LTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>Mature_213_residues
ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQL
TDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNT
TNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family

Homologues:

Organism=Escherichia coli, GI1790847, Length=214, Percent_Identity=100, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMP_ECO57 (P60777)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A98297
- PIR:   C86138
- RefSeq:   NP_291000.1
- RefSeq:   NP_313372.1
- ProteinModelPortal:   P60777
- EnsemblBacteria:   EBESCT00000025308
- EnsemblBacteria:   EBESCT00000059293
- GeneID:   913498
- GeneID:   959668
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- GeneTree:   EBGT00050000010598
- GeneTree:   EBGT00050000010599
- HOGENOM:   HBG416714
- OMA:   RITLDTH
- ProtClustDB:   PRK14061
- InterPro:   IPR019305

Pfam domain/function: PF10144 SMP_2

EC number: NA

Molecular weight: Translated: 24083; Mature: 23952

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA
HHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCEEHHHHHHCCCCCC
GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT
CCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
HHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCC
>Mature Secondary Structure 
ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA
HHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCEEHHHHHHCCCCCC
GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT
CCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
HHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796