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The map label for this gene is yjiM [H]

Identifier: 157163781

GI number: 157163781

Start: 4569707

End: 4570858

Strand: Reverse

Name: yjiM [H]

Synonym: EcHS_A4563

Alternate gene names: 157163781

Gene position: 4570858-4569707 (Counterclockwise)

Preceding gene: 157163782

Following gene: 157163780

Centisome position: 98.43

GC content: 53.3

Gene sequence:

>1152_bases
ATGTCACTTATCACCGATCTACCCGCCATTTTCGATCAGTTCTCTGAAGCTCGCCAGAAAGGCTTTCTCACCGTCATGGA
TCTCAAGGAGCGCGGCATTCCGCTGGTTGGCACTTACTGCACCTTTATGCCGCAAGAGATCCCGATGGCAGCCGGTGCGG
TTGTGGTTTCGCTCTGTTCTACCTCTGATGAAACCATTGAAGAAGCGGAGAAAGATCTGCCGCGCAACCTCTGCCCGCTG
ATTAAAAGCAGCTACGGCTTCGGCAAAACCGATAAATGCCCCTACTTCTACTTTTCGGATCTGGTGGTCGGTGAAACCAC
CTGCGACGGCAAAAAGAAAATGTATGAATACATGGCGGAGTTTAAGCCCGTTCATGTGATGCAGTTGCCGAACAGCGTTA
AGGACGATGCCTCGCGTGCGTTATGGAAAGCCGAGATGCTGCGCTTGCAAAAAACGATAGAAGAACGTTTTGGGCACGAG
ATTAGCGAAGATGCTCTGCGCGATGCCATTGCGCTGAAAAACCGCGAACGTCGCGCACTGGCCAATTTTTATCATCTTGG
GCAGTTAAATCCTCCGGCGCTTAGCGGCAGCGACATTCTGAAAGTGGTTTACGGCGCAACCTTCCGGTTCGATAAAGAGG
CGTTGATCAATGAACTGGACGCGATGACAGCCCGCGTTCGTCAGCAGTGGGAAGAAGGCCAGCGGCTGGCCCTGCGTCCA
CGCATTTTAATCACCGGCTGCCCGATTGGCGGCGCAGCAGAAAAAGTGGTGCGCGCGATTGAAGAGAATGGCGGCTGGGT
TGTCGGTTATGAAAACTGCACCGGGGCGAAAGCGACCGAGCAATGCGTGGCAGAAACGGGCGATGTCTACGACGCACTGG
CGGATAAATATCTGGCGATTGGCTGCTCCTGTGTTTCGCCGAACGATCAGCGCCTGCAAATGCTCAGCCAGATGGTGGAA
GAATATCAGGTCGATGGCGTAGTTGATGTGATTTTGCAGGCGTGCCATACCTACGCGGTGGAATCGCTGGCGATTAAACG
TCATGTGCGTCAGCAGCACAACATTCCTTATATCGCTATTGAAACAGACTACTCCACCTCAGATGTCGGGCAGCTCAGTA
CCCGTGTCGCGGCCTTTATTGAGATGCTGTAA

Upstream 100 bases:

>100_bases
TAAGTGGCTAACCGCGAGAGAGATCAAATAAACCACACTAAAAGAATGGTAATAATGTGGCCTCTTTTCATTATCTCCCG
TGGTACGGGGAAGGAAAATC

Downstream 100 bases:

>100_bases
GGAGTGGCAGTGACATATTCGATTGGCATTGATTCTGGTTCTACCGCCACCAAAGGGATCTTACTGGCAGACGGCGTGAT
TACGCGCCGTTTCCTCGTTC

Product: putative 2-hydroxyglutaryl-CoA dehydratase, D-component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTIEERFGHE
ISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLALRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLQMLSQMVE
EYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML

Sequences:

>Translated_383_residues
MSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTIEERFGHE
ISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLALRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLQMLSQMVE
EYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
>Mature_382_residues
SLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLI
KSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTIEERFGHEI
SEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLALRPR
ILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLQMLSQMVEE
YQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=383, Percent_Identity=98.4334203655353, Blast_Score=789, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 42770; Mature: 42639

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS
CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCEEEHHHHHCCHHCCHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKPVHVMQLPNSVKDDASRALWKAEMLRLQKTIEERFGHEISEDALRDAIALKNRERRAL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
ANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLALRP
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAI
EEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
GCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAI
EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTSDVGQLSTRVAAFIEML
ECCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS
CHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCEEEHHHHHCCHHCCHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKPVHVMQLPNSVKDDASRALWKAEMLRLQKTIEERFGHEISEDALRDAIALKNRERRAL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
ANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLALRP
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAI
EEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
GCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAI
EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTSDVGQLSTRVAAFIEML
ECCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]