| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is yjiJ [H]
Identifier: 157163778
GI number: 157163778
Start: 4566505
End: 4567683
Strand: Reverse
Name: yjiJ [H]
Synonym: EcHS_A4560
Alternate gene names: 157163778
Gene position: 4567683-4566505 (Counterclockwise)
Preceding gene: 157163779
Following gene: 157163776
Centisome position: 98.37
GC content: 53.35
Gene sequence:
>1179_bases ATGCCTTCGTCCTCGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCTGGTTCTGACCCTAGGTAT GGGATTAGGTCGCTTCCTTTATACGCCTATGTTGCCCGTCATGATGGCGGAAGGGGCGTTTTCATTTAGCCAGCTCTCGT GGATTGCCAGCGGCAACTATGCGGGGTATCTGGCTGGCAGTCTGCTATTTTCGTTTGGCGCATTTCACCAGCCGTCGCGC CTACGCCCATTTCTGTTGGTTTCTGCCCTGGCGAGCGGGTTGTTGATCCTCGCAATGGCATGGTTGCCGCCATTTATTCT GGTGTTATTGATTCGCTTCCTGGCGGGTGTCGCCAGCGCCGGTATGCTGATTTTTGGTTCGACGCTGATTATGCAGCACA CGCGCCATCCTTTTGTGCTGGCAGCTTTGTTTTCTGGCGTTGGCATTGGCATTGCACTGGGCAACGAATATGTTCTGGCA GGCCTGCATTTTGCCTTATCCTCGCAAACGTTATGGCAAGGCGCCGGGGCGCTTTCTGGCATGATGCTGATTGCACTTAC GCTTTTAATGCCCTCGAAAAAACACGCCATCGCACCAATGCCATTGGCAAAAACGGAGCAACAGATAATGAGCTGGTGGT TACTGGCTATTCTGTACGGCCTGGCGGGATTTGGTTATATCATCGTCGCGACTTACCTGCCGCTCATGGCGAAAGATGCA GGCTCACCATTGTTAACCGCCCATCTCTGGACGTTAGTCGGCTTATCAATTGTGCCAGGCTGCTTTAGCTGGCTATGGGC AGCAAAACGTTGGGGGGCTTTGCCTTGCCTGACGGCGAATTTGCTGGTGCAGGCTATCAGTGTGCTGCTTACTCTCGCCA GCGACTCTCCTCTCTTGCTTATCATTAGTAGTATCGGTTTTGGCGGTACCTTTATGGGCACGACATCTCTGGTGATGACT ATCGCCCGCCAACTGAGCGTTCCGGGAAATCTCAATCTTTTAGGCTTTGTGACGCTCATTTACGGCATTGGACAAATCCT CGGCCCGGCGCTGACCAGTATGCTCGGCAATGGAACATCGGCGCTTGCCGGCGCCACTCTCTGCGGCGCGGCGGCGTTGT TTATTGCTGCGCTTATCAGCACAGTACAATTATTTAAGCTGCAAGTGGTCACTTCATGA
Upstream 100 bases:
>100_bases TTTTATCGCTTTACCCCTAAATCATCGCATTAACAGGCTGGCATATTTCACCTTTTTGTTATTAACTTGTTAACAACAAA AATGACATACAAGGTTAAAC
Downstream 100 bases:
>100_bases GGAGTGTTTCCCTTACCACTCAAGAAATTCGACCGCAACCGTTGATGTCAGCCAGACTCCGTTTTCCGCTTGCCAGAAAG GGATGCCTCGTTTCGCCATT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR LRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA GLHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMT IARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
Sequences:
>Translated_392_residues MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR LRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA GLHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMT IARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS >Mature_391_residues PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRL RPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAG LHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAG SPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTI ARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=392, Percent_Identity=97.1938775510204, Blast_Score=715, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010645 - InterPro: IPR016196 [H]
Pfam domain/function: PF06779 DUF1228 [H]
EC number: NA
Molecular weight: Translated: 41287; Mature: 41156
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC AGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFALSSQTLWQGAGALSG CHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHH MMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALAGATLCGAAALFIAALISTVQLFKLQVVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC AGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFALSSQTLWQGAGALSG CHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHH MMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALAGATLCGAAALFIAALISTVQLFKLQVVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]