Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

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The map label for this gene is yjiJ [H]

Identifier: 157163778

GI number: 157163778

Start: 4566505

End: 4567683

Strand: Reverse

Name: yjiJ [H]

Synonym: EcHS_A4560

Alternate gene names: 157163778

Gene position: 4567683-4566505 (Counterclockwise)

Preceding gene: 157163779

Following gene: 157163776

Centisome position: 98.37

GC content: 53.35

Gene sequence:

>1179_bases
ATGCCTTCGTCCTCGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCTGGTTCTGACCCTAGGTAT
GGGATTAGGTCGCTTCCTTTATACGCCTATGTTGCCCGTCATGATGGCGGAAGGGGCGTTTTCATTTAGCCAGCTCTCGT
GGATTGCCAGCGGCAACTATGCGGGGTATCTGGCTGGCAGTCTGCTATTTTCGTTTGGCGCATTTCACCAGCCGTCGCGC
CTACGCCCATTTCTGTTGGTTTCTGCCCTGGCGAGCGGGTTGTTGATCCTCGCAATGGCATGGTTGCCGCCATTTATTCT
GGTGTTATTGATTCGCTTCCTGGCGGGTGTCGCCAGCGCCGGTATGCTGATTTTTGGTTCGACGCTGATTATGCAGCACA
CGCGCCATCCTTTTGTGCTGGCAGCTTTGTTTTCTGGCGTTGGCATTGGCATTGCACTGGGCAACGAATATGTTCTGGCA
GGCCTGCATTTTGCCTTATCCTCGCAAACGTTATGGCAAGGCGCCGGGGCGCTTTCTGGCATGATGCTGATTGCACTTAC
GCTTTTAATGCCCTCGAAAAAACACGCCATCGCACCAATGCCATTGGCAAAAACGGAGCAACAGATAATGAGCTGGTGGT
TACTGGCTATTCTGTACGGCCTGGCGGGATTTGGTTATATCATCGTCGCGACTTACCTGCCGCTCATGGCGAAAGATGCA
GGCTCACCATTGTTAACCGCCCATCTCTGGACGTTAGTCGGCTTATCAATTGTGCCAGGCTGCTTTAGCTGGCTATGGGC
AGCAAAACGTTGGGGGGCTTTGCCTTGCCTGACGGCGAATTTGCTGGTGCAGGCTATCAGTGTGCTGCTTACTCTCGCCA
GCGACTCTCCTCTCTTGCTTATCATTAGTAGTATCGGTTTTGGCGGTACCTTTATGGGCACGACATCTCTGGTGATGACT
ATCGCCCGCCAACTGAGCGTTCCGGGAAATCTCAATCTTTTAGGCTTTGTGACGCTCATTTACGGCATTGGACAAATCCT
CGGCCCGGCGCTGACCAGTATGCTCGGCAATGGAACATCGGCGCTTGCCGGCGCCACTCTCTGCGGCGCGGCGGCGTTGT
TTATTGCTGCGCTTATCAGCACAGTACAATTATTTAAGCTGCAAGTGGTCACTTCATGA

Upstream 100 bases:

>100_bases
TTTTATCGCTTTACCCCTAAATCATCGCATTAACAGGCTGGCATATTTCACCTTTTTGTTATTAACTTGTTAACAACAAA
AATGACATACAAGGTTAAAC

Downstream 100 bases:

>100_bases
GGAGTGTTTCCCTTACCACTCAAGAAATTCGACCGCAACCGTTGATGTCAGCCAGACTCCGTTTTCCGCTTGCCAGAAAG
GGATGCCTCGTTTCGCCATT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR
LRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA
GLHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA
GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMT
IARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS

Sequences:

>Translated_392_residues
MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR
LRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA
GLHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA
GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMT
IARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
>Mature_391_residues
PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRL
RPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAG
LHFALSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAG
SPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTI
ARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790788, Length=392, Percent_Identity=97.1938775510204, Blast_Score=715, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010645
- InterPro:   IPR016196 [H]

Pfam domain/function: PF06779 DUF1228 [H]

EC number: NA

Molecular weight: Translated: 41287; Mature: 41156

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
AGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFALSSQTLWQGAGALSG
CHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHH
MMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
IISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALAGATLCGAAALFIAALISTVQLFKLQVVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
AGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFALSSQTLWQGAGALSG
CHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHH
MMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
IISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALAGATLCGAAALFIAALISTVQLFKLQVVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]