Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is fimG
Identifier: 157163763
GI number: 157163763
Start: 4553293
End: 4553796
Strand: Direct
Name: fimG
Synonym: EcHS_A4545
Alternate gene names: 157163763
Gene position: 4553293-4553796 (Clockwise)
Preceding gene: 157163762
Following gene: 157163764
Centisome position: 98.06
GC content: 52.58
Gene sequence:
>504_bases ATGAAATGGTGCAAACGTGGGTATGTATTGGCGGCAATATTGGCGCTCGCAAGTGCGACGATACAGGCAGCCGATGTCAC CATCACGGTGAACGGTAAGGTCGTCGCCAAACCGTGCACAGTTTCCACCACCAATGCCACGGTTGATCTCGGCGATCTTT ATTCTTTCAGTCTGATGTCTGCCGGGGCGGCATCGGCCTGGCATGATGTTGCGCTTGAGTTGACTAATTGTCCGGTGGGA ACGTCGAGGGTCACTGCCAGCTTCAGCGGGGCAGCCGACAGTACCGGATATTATAAAAACCAGGGGACCGCGCAAAACAT CCAGTTAGAGCTACAGGATGACAGTGGCAACACATTGAATACTGGCGCAACCAAAACAGTTCAGGTGGATGATTCCTCAC AATCAGCGCACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTCAGGCAGTGATT AGCATCACCTATACCTACAGCTGA
Upstream 100 bases:
>100_bases TTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCAGGGCATATCAATGCCACGGCTACCTTCACTCTTGAAT ATCAGTAACTGGAGATGCTC
Downstream 100 bases:
>100_bases ACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGT CATTCGCCTGTAAAACCGCC
Product: protein fimG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS
Sequences:
>Translated_167_residues MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS >Mature_167_residues MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS
Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Fimbrium
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family
Homologues:
Organism=Escherichia coli, GI1790774, Length=167, Percent_Identity=100, Blast_Score=337, Evalue=2e-94, Organism=Escherichia coli, GI1787780, Length=166, Percent_Identity=57.2289156626506, Blast_Score=203, Evalue=6e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FIMG_ECOLI (P08190)
Other databases:
- EMBL: X05672 - EMBL: U14003 - EMBL: U00096 - EMBL: AP009048 - PIR: S56544 - RefSeq: AP_004811.1 - RefSeq: NP_418739.1 - PDB: 3BFQ - PDB: 3BFW - PDB: 3JWN - PDBsum: 3BFQ - PDBsum: 3BFW - PDBsum: 3JWN - ProteinModelPortal: P08190 - SMR: P08190 - DIP: DIP-9615N - STRING: P08190 - EnsemblBacteria: EBESCT00000002714 - EnsemblBacteria: EBESCT00000014656 - GeneID: 948846 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW4282 - KEGG: eco:b4319 - EchoBASE: EB0310 - EcoGene: EG10314 - eggNOG: COG3539 - GeneTree: EBGT00050000008607 - HOGENOM: HBG701898 - OMA: WCKRGYL - ProtClustDB: CLSK880033 - BioCyc: EcoCyc:EG10314-MONOMER - Genevestigator: P08190 - GO: GO:0009289 - InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 - Gene3D: G3DSA:2.60.40.1090
Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact
EC number: NA
Molecular weight: Translated: 17317; Mature: 17317
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS CCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCEEEECCCEEECCCCEEECCCCCEEHHHC AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEEEECCCCCEEE TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS CCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS CCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCEEEECCCEEECCCCEEECCCCCEEHHHC AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEEEECCCCCEEE TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS CCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2890081; 7610040; 9278503