Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is ecnB1
Identifier: 157163615
GI number: 157163615
Start: 4401850
End: 4401996
Strand: Direct
Name: ecnB1
Synonym: EcHS_A4391
Alternate gene names: 157163615
Gene position: 4401850-4401996 (Clockwise)
Preceding gene: 157163614
Following gene: 157163616
Centisome position: 94.8
GC content: 47.62
Gene sequence:
>147_bases ATGGTGAAGAAGACAATTGCAGCGATCTTTTCTGTTCTGGTGCTTTCAACAGTATTAACTGCCTGCAACACCACGCGTGG CGTTGGTGAAGACATTTCTGATGGCGGTAACGCGATTTCTGGTGCAGCAACGAAAGCGCAGCAATAA
Upstream 100 bases:
>100_bases CTTCCGAAAAATCATCAGATTTCCATCATTTTTGGCGATGTTGTCTATTATTAATTTGCTATAGGCAAACATAAATAACA TTACCTAAAAGGAAGACGTT
Downstream 100 bases:
>100_bases GCAATAACGGTACGACAGTTATGTCGTGCCGTTTGTTTTTTTGCGATAGTCACAAAGGTAATAGTTGAAATTCCCCTGCC ACCTGGCAAAATATCCGTTC
Product: entericidin B membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ
Sequences:
>Translated_48_residues MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ >Mature_48_residues MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ
Specific function: Plays a role in the bacteriolysis. Is activated under conditions of high osmolarity by the factor sigma S. Entericidin A functions as an antidote
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ecnA/ecnB lipoprotein family
Homologues:
Organism=Escherichia coli, GI48994999, Length=48, Percent_Identity=100, Blast_Score=95, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ECNB_ECO57 (P0ADB9)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: H86110 - RefSeq: NP_290782.1 - EnsemblBacteria: EBESCT00000026618 - EnsemblBacteria: EBESCT00000058081 - GeneID: 959974 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5754 - GeneTree: EBGT00050000011663 - HOGENOM: HBG754046 - ProtClustDB: PRK10081 - InterPro: IPR012556
Pfam domain/function: PF08085 Entericidin
EC number: NA
Molecular weight: Translated: 4810; Mature: 4810
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796