Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is fxsA
Identifier: 157163605
GI number: 157163605
Start: 4392687
End: 4393163
Strand: Direct
Name: fxsA
Synonym: EcHS_A4381
Alternate gene names: 157163605
Gene position: 4392687-4393163 (Clockwise)
Preceding gene: 157163594
Following gene: 157163607
Centisome position: 94.6
GC content: 47.8
Gene sequence:
>477_bases TTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATT GGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGGATGTCACTGGTACGTAACCAGGGCTTTAAGA ATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGTGTTTCGCTGATCATT GCCGGTTTGCTGCTTTTATTACCGGGCTTTTTCACCGACTTCCTCGGTCTTCTGCTTTTATTACCGCCGGTGCAAAAGCA TCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGTATGCCAGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTA ATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAA
Upstream 100 bases:
>100_bases ACATCTTGAAATTTTGCTAATGACCACAATATAAGCTGAACGCGATTCGCAACCCATTCAGGTAGCCGGGTTTTACCGGC TGCTATTACAGGAGAAACCT
Downstream 100 bases:
>100_bases TGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCA TGATCAGCGCATAGAGACTT
Product: FxsA
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD
Sequences:
>Translated_158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD >Mature_158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD
Specific function: Overexpression alleviates the exclusion of phage T7 in cells harboring the F plasmid
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family
Homologues:
Organism=Escherichia coli, GI87082376, Length=158, Percent_Identity=100, Blast_Score=318, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FXSA_ECOLI (P37147)
Other databases:
- EMBL: U78484 - EMBL: U14003 - EMBL: U00096 - EMBL: AP009048 - EMBL: X04066 - PIR: S56368 - RefSeq: AP_004641.1 - RefSeq: NP_418564.2 - ProteinModelPortal: P37147 - STRING: P37147 - EnsemblBacteria: EBESCT00000001560 - EnsemblBacteria: EBESCT00000017792 - GeneID: 948657 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW4100 - KEGG: eco:b4140 - EchoBASE: EB2284 - EcoGene: EG12382 - eggNOG: COG3030 - GeneTree: EBGT00050000010053 - HOGENOM: HBG687714 - OMA: DKRPESH - ProtClustDB: PRK11463 - BioCyc: EcoCyc:G7832-MONOMER - Genevestigator: P37147 - InterPro: IPR007313
Pfam domain/function: PF04186 FxsA
EC number: NA
Molecular weight: Translated: 17692; Mature: 17692
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x189e26a4)-; HASH(0x405468e4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCH >Mature Secondary Structure MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10497016; 7610040; 9278503; 3541901; 7984428; 10497017