Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yjcZ [H]
Identifier: 157163575
GI number: 157163575
Start: 4353414
End: 4354259
Strand: Direct
Name: yjcZ [H]
Synonym: EcHS_A4350
Alternate gene names: 157163575
Gene position: 4353414-4354259 (Clockwise)
Preceding gene: 157163574
Following gene: 157163576
Centisome position: 93.75
GC content: 56.97
Gene sequence:
>846_bases GTGCTGGAGTCGGTTTATCCCCGCTTTTTAGTGGATCTGGCGCAGGGCGATGATGCCCGCCTTCCACAAGCCCATCAGCA GCAGTTTCGTGAACGACTGATGCAGGAACTTCTTGCGCGCGTGCAGCTTCAGACATGGACGAACGGCGGCATGTTAAATG CGCCGCTTAGCCTGCGACTGACAATGGTGGAAAAACTGGCGTCGATGCTGGATCCCGGTCATCTGGCGCTGACGCAGATC GCGCAGCATCTGGCGCTGCTGCAAAAAATGGATCACCGCCAGCACTCTGCTTTCCCGGAGCTCCCCCAGCAAATTGCCGC CTTGTATGAGTGGTTTTCAGCCCGTTGCCGCTGGAAGGAAAAGGCGTTAACGCAACGAGGCCTACTGGTGCAGGCAGGTG ATCAGAGCGAGCAAATTTTTACCCGCTGGCGTGCTGGGGCGTATAACACCTGGTCGTTGCCTGGGCGCTGTTTTATCGTT CTCGAAGAGTTGCGTTGGGGGGCATTTGGCGATGCCTGCCGTCTGGGAAGCCCGCAAGCGGTGGCGTTGTTGCTGGGGGA TTTGCGCGTGAAAGCGACACAACATCTGGCAGAGAGTATCAATGCGGCCCCGACCACGCGTCACTATTACCATCAGTGGT TTGCCTCTTCGACCGTTCCGACGGGCGGGGATCATGCTGATTTTTTAAGTTGGCTGGGAAAGTGGACCACGGCAGATAAA CAACCCGTTTGCTGGTCAGTGACCCAACGCTGGCAAACTGTCGCGCTGGGGATGCCACGACTCTGTTCAGCGCAGCGTTT GGTGGGGGCAATGGTCGAGGAAATCTTCTCTGTAAATTTGGCGTAA
Upstream 100 bases:
>100_bases GCTGGATTTACACCGACGCCCAGCTGTTACGCGATGATATTCAAACACTTTTCACGGCAGAACGATATTGACCAAGACGT TACTTGACGGCCCCGGTCGC
Downstream 100 bases:
>100_bases ATAATCAGTTACATCAATGAGTCCTAAACGAAATTCATGTGTGAAGTTGATCACAAATTTAAACACTGGTAGGGTAAAAA GGTCATTAACTGCCCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTMVEKLASMLDPGHLALTQI AQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIV LEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK QPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA
Sequences:
>Translated_281_residues MLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTMVEKLASMLDPGHLALTQI AQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIV LEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK QPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA >Mature_281_residues MLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTMVEKLASMLDPGHLALTQI AQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIV LEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK QPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082371, Length=281, Percent_Identity=96.797153024911, Blast_Score=561, Evalue=1e-161,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31806; Mature: 31806
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRL CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH TMVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIVLEELRWGAFGDACRLGSPQA HHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCCHHCCCCCHH VALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC QPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRL CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH TMVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIVLEELRWGAFGDACRLGSPQA HHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCCCHHCCCCCHH VALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC QPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]