Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is psiE
Identifier: 157163499
GI number: 157163499
Start: 4272069
End: 4272479
Strand: Direct
Name: psiE
Synonym: EcHS_A4270
Alternate gene names: 157163499
Gene position: 4272069-4272479 (Clockwise)
Preceding gene: 157163497
Following gene: 157163504
Centisome position: 92.0
GC content: 49.15
Gene sequence:
>411_bases ATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCTTGGCCTGTTGTGCCT CGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCA AATATGAGCTGGTAGAAGGGCTGGTGGTTTACTTTCTCTATTTCGAATTTATCGCGCTGATTGTGAAGTACTTTCAGTCC GGTTTTCACTTCCCGCTACGTTACTTTGTCTATATCGGGATCACCGCCATTGTGCGCTTGATCATTGTCGATCATAAATC GCCACTGGATGTGTTGATCTACTCGGCTGCGATCCTGTTACTGGTGATCACCCTGTGGCTGTGTAATTCGAAACGGCTGA AGCGGGAGTAA
Upstream 100 bases:
>100_bases CCCACTTAATCAAGCTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCC ACTGTGAAGGAGGTACTGCT
Downstream 100 bases:
>100_bases AAAGACAGCACGCCGAACTGGCGCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCC GGTTCCCAGAGGGCTTCCAG
Product: phosphate-starvation-inducible protein PsiE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQS GFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE
Sequences:
>Translated_136_residues MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQS GFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE >Mature_135_residues TSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQSG FHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psiE family
Homologues:
Organism=Escherichia coli, GI1790462, Length=136, Percent_Identity=100, Blast_Score=269, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSIE_ECO24 (A7ZUQ1)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001465530.1 - ProteinModelPortal: A7ZUQ1 - STRING: A7ZUQ1 - EnsemblBacteria: EBESCT00000022913 - GeneID: 5587025 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_4581 - eggNOG: COG3223 - GeneTree: EBGT00050000009950 - HOGENOM: HBG341415 - OMA: FQSGYHF - ProtClustDB: PRK02833 - BioCyc: ECOL331111:ECE24377A_4581-MONOMER - HAMAP: MF_01048 - InterPro: IPR009315 - InterPro: IPR020948 - PIRSF: PIRSF029598
Pfam domain/function: PF06146 PsiE
EC number: NA
Molecular weight: Translated: 15597; Mature: 15466
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18ec4ba4)-; HASH(0x405549cc)-; HASH(0x40554414)-; HASH(0x15b130a8)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVITLWLCNSKRLKRE HHHHHHHHCCHHCCCH >Mature Secondary Structure TSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVITLWLCNSKRLKRE HHHHHHHHCCHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA