Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

Click here to switch to the map view.

The map label for this gene is yhhM [H]

Identifier: 157162944

GI number: 157162944

Start: 3651521

End: 3651880

Strand: Reverse

Name: yhhM [H]

Synonym: EcHS_A3666

Alternate gene names: 157162944

Gene position: 3651880-3651521 (Counterclockwise)

Preceding gene: 157162947

Following gene: 157162941

Centisome position: 78.64

GC content: 50.83

Gene sequence:

>360_bases
ATGAGCAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATTGTCGTCGCCGCATCGTTTCGTTTTATGCAACAGCG
ACGGGAAAAAGCTGATAATGATATGGCTCCGCTCCAGCAAAAGCTGGTGGTGGTGAGCAACAAGCGGGAAAAACCGATTA
ACGATCGCCGTTCGCGCCAGCAGGAAGTGACTCCGGCAGGCACCAGTATGCGCTATGAGGCAAGCTTCAAACCGCAAAGC
GGAGGAATGGAGCAAACGTTTCGCCTCGACGCCCAGCAGTACCACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTA
TAAAGGAACGCGCTTTGTTAGCTTTGTTGGCGAACAATAA

Upstream 100 bases:

>100_bases
CCTACGGTCTTGCTTCCAGTTTAGTGGCGAGGGTGGACGGATGACAACACCATAACTGGCAGGGTATGCTTATTTCCGCA
TTTTCCGATGAGGGATAAAG

Downstream 100 bases:

>100_bases
GGTTATTTTTTAACTTTAAATTTCTTCTGCCAGACCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGCACCTTTTCGGC
GGTGGTCATCTGCGGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS
GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ

Sequences:

>Translated_119_residues
MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS
GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ
>Mature_118_residues
SKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSG
GMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789877, Length=119, Percent_Identity=99.1596638655462, Blast_Score=243, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019635 [H]

Pfam domain/function: PF10694 DUF2500 [H]

EC number: NA

Molecular weight: Translated: 13515; Mature: 13384

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ
HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC
>Mature Secondary Structure 
SKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ
HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]