Click here to switch to the map view.

The map label for this gene is yrfG [H]

Identifier: 157162875

GI number: 157162875

Start: 3573028

End: 3573696

Strand: Direct

Name: yrfG [H]

Synonym: EcHS_A3595

Alternate gene names: 157162875

Gene position: 3573028-3573696 (Clockwise)

Preceding gene: 157162874

Following gene: 157162876

Centisome position: 76.95

GC content: 51.27

Gene sequence:

>669_bases
ATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGA
TAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGCCACAGGAAGCGATGGAATATA
TGCGCCAGCAATATCACGACGTACAGCATACGCTAAACTGGTACTGTCTTGATTACTGGAGTGAGCAACTGGGTCTGGAT
ATCTGTGCGATGACCACCGAGATGGGACCGCGTGCCGTACTGCGTGAAGATACCATTCCGTTTCTTGAGGCACTGAAAGC
CAGCGGTAAGCAGCGAATTTTGCTCACCAATGCGCATCCGCACAACCTGTCGGTAAAACTTGAGCATACGGGTCTGGACG
CACACCTTGATTTATTACTTTCCACCCACACATTTGGTTATCCGAAAGAGGATCAGCGGTTATGGCATGCAGTGGCCGAA
GCTACGGGTCTGAAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTAT
TCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACT
ACCGCCGCCTGATCCCCTCGCTAATGTGA

Upstream 100 bases:

>100_bases
CAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCT
TCACTCTGGAGATTTCCCTC

Downstream 100 bases:

>100_bases
AGGAGACGCCATGAAAGAAAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCC
GCGCGCTGGCCCGTGAAATG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLD
ICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLSVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM

Sequences:

>Translated_222_residues
MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLD
ICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLSVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM
>Mature_222_residues
MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLD
ICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLSVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=222, Percent_Identity=99.5495495495496, Blast_Score=462, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25415; Mature: 25415

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHD
CEEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHH
VQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHP
HHHHHHHHHHHHHHHHHCCCCEEHHHCCCCHHHHHCCCHHHHHHHHCCCCCEEEEECCCC
HNLSVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILD
CCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
AAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM
HHHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHD
CEEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHH
VQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHP
HHHHHHHHHHHHHHHHHCCCCEEHHHCCCCHHHHHCCCHHHHHHHHCCCCCEEEEECCCC
HNLSVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILD
CCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
AAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM
HHHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]