Click here to switch to the map view.

The map label for this gene is yhfL

Identifier: 157162845

GI number: 157162845

Start: 3543793

End: 3543960

Strand: Direct

Name: yhfL

Synonym: EcHS_A3565

Alternate gene names: 157162845

Gene position: 3543793-3543960 (Clockwise)

Preceding gene: 157162844

Following gene: 157162846

Centisome position: 76.32

GC content: 42.26

Gene sequence:

>168_bases
ATGAACAAATTTATTAAAGTTGCACTGGTAGGTGCAGTACTGGCTACGTTAACTGCATGTACTGGTCATATTGAAAACCG
TGATAAGAACTGCTCTTACGACTACCTGCTGCACCCGGCAATTTCTATTTCTAAAATCATTGGCGGTTGCGGTCCTACTG
CACAGTAA

Upstream 100 bases:

>100_bases
GACGCCAATTAAATATTCCTGTATCGTTCTTAACGAGCAGTCTGCTTATATTCATATAATCAATGAATATTAATTAATAT
ATAATACATAGGGAATGTAA

Downstream 100 bases:

>100_bases
GTCTCTGACAGAAATCGGCTAACACCGGTTTAATTGCCCGACGCCCTCTGGATTTTCCGAGGGCGTATTTGTTTCTATGT
CCTTCTTGCCCCCGCCCGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ

Sequences:

>Translated_55_residues
MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ
>Mature_55_residues
MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789770, Length=55, Percent_Identity=100, Blast_Score=115, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFL_ECO57 (P64629)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A86002
- PIR:   D91156
- RefSeq:   NP_289917.1
- RefSeq:   NP_312247.1
- ProteinModelPortal:   P64629
- EnsemblBacteria:   EBESCT00000028707
- EnsemblBacteria:   EBESCT00000060399
- GeneID:   915927
- GeneID:   958832
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4730
- KEGG:   ecs:ECs4220
- GeneTree:   EBGT00050000010831
- HOGENOM:   HBG467976
- OMA:   SISKMIG
- ProtClustDB:   CLSK880640
- BioCyc:   ECOL83334:ECS4220-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5819; Mature: 5819

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17d4b8a8)-;

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796