Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 157162816
GI number: 157162816
Start: 3515743
End: 3517857
Strand: Reverse
Name: fusA [H]
Synonym: EcHS_A3536
Alternate gene names: 157162816
Gene position: 3517857-3515743 (Counterclockwise)
Preceding gene: 157162817
Following gene: 157162815
Centisome position: 75.76
GC content: 50.83
Gene sequence:
>2115_bases ATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTAC CGAACGTATTCTGTTCTACACCGGTGTAAACCATAAAATCGGTGAAGTTCATGACGGCGCTGCAACCATGGACTGGATGG AGCAGGAGCAGGAACGTGGTATTACCATCACTTCCGCTGCGACTACTGCATTCTGGTCTGGTATGGCTAAGCAGTATGAG CCGCATCGCATCAACATCATCGACACCCCGGGGCACGTTGACTTCACAATCGAAGTAGAACGTTCCATGCGTGTTCTCGA TGGTGCGGTAATGGTTTACTGCGCAGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAGGCAAACAAATATA AAGTTCCGCGCATTGCGTTCGTTAACAAAATGGACCGCATGGGTGCGAACTTCCTGAAAGTTGTTAACCAGATCAAAACC CGTCTGGGCGCGAACCCGGTTCCGCTGCAGCTGGCGATTGGTGCTGAAGAACATTTCACCGGTGTTGTTGACCTGGTGAA AATGAAAGCTATCAACTGGAACGACGCTGACCAGGGCGTAACCTTCGAATACGAAGATATCCCGGCAGACATGGTTGAAC TGGCTAACGAATGGCACCAGAACCTGATCGAATCCGCAGCTGAAGCTTCTGAAGAGCTGATGGAAAAATACCTGGGTGGT GAAGAACTGACTGAAGCAGAAATCAAAGGTGCTCTGCGTCAGCGCGTTCTGAACAACGAAATCATCCTGGTAACCTGTGG TTCTGCGTTCAAGAACAAAGGTGTTCAGGCGATGCTGGATGCGGTAATCGATTACCTGCCATCCCCGGTTGACGTACCTG CGATCAACGGTATCCTGGACGACGGTAAAGACACTCCGGCTGAACGTCACGCAAGTGATGACGAGCCGTTCTCTGCACTG GCGTTCAAAATCGCTACCGACCCGTTTGTTGGTAACCTGACCTTCTTCCGTGTTTACTCCGGTGTGGTTAACTCTGGTGA TACCGTACTGAACTCCGTGAAAGCTGCACGTGAGCGTTTCGGTCGTATCGTTCAGATGCACGCTAACAAACGTGAAGAGA TCAAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCG GATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGA CCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTA ACCAGACCATCATTGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAA GCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAA ACAGTCTGGTGGTCGTGGTCAGTATGGTCATGTTGTTATCGACATGTACCCGCTGGAGCCGGGTTCAAACCCGAAAGGCT ACGAGTTCATCAACGACATTAAAGGTGGTGTAATCCCTGGCGAATACATCCCGGCCGTTGATAAAGGTATCCAGGAACAG CTGAAAGCAGGTCCGCTGGCAGGCTACCCGGTAGTAGACATGGGTATTCGTCTGCACTTCGGTTCTTACCATGACGTTGA CTCCTCTGAACTGGCGTTTAAACTGGCTGCTTCTATCGCCTTTAAAGAAGGCTTTAAGAAAGCGAAACCAGTTCTGCTTG AGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACCGGTGACGTTATCGGTGACTTGAGCCGTCGTCGTGGT ATGCTCAAAGGTCAGGAATCTGAAGTTACTGGCGTTAAGATCCACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGC AACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACG TTGCTCAGGCCGTAATTGAAGCCCGTGGTAAATAA
Upstream 100 bases:
>100_bases GTAATCCCTTCGGAGTTTTAGTCACCAGGCGGGCGCTTCCAGTAAGCAGCCCGCTTTGGGCTACTTAAATTGAACGCCTA AAAGATAAACGAGGAAACAA
Downstream 100 bases:
>100_bases GCCTAAGGGTTAATACCAAAGTCCCGTGCTCTCTCCTGAAGGGGAGAGCACTATAGTAAGGAATATAGCCGTGTCTAAAG AAAAATTTGAACGTACAAAA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP DAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQ LKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG MLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK
Sequences:
>Translated_704_residues MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYE PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSAL AFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP DAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQ LKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG MLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK >Mature_703_residues ARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEP HRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTR LGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGE ELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALA FKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPD APIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEA NVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQL KAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGM LKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=712, Percent_Identity=44.6629213483146, Blast_Score=571, Evalue=1e-162, Organism=Homo sapiens, GI19923640, Length=718, Percent_Identity=38.1615598885794, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI25306287, Length=718, Percent_Identity=36.4902506963788, Blast_Score=406, Evalue=1e-113, Organism=Homo sapiens, GI25306283, Length=457, Percent_Identity=40.4814004376368, Blast_Score=300, Evalue=3e-81, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=36.3636363636364, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI94966754, Length=140, Percent_Identity=38.5714285714286, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI4503483, Length=150, Percent_Identity=38.6666666666667, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI310110807, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI310123363, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=45.5882352941176, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=100, Blast_Score=1451, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=493, Percent_Identity=25.9634888438134, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI48994988, Length=345, Percent_Identity=28.695652173913, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788922, Length=155, Percent_Identity=35.4838709677419, Blast_Score=90, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17533571, Length=709, Percent_Identity=43.1593794076164, Blast_Score=529, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17556745, Length=710, Percent_Identity=29.4366197183099, Blast_Score=295, Evalue=7e-80, Organism=Caenorhabditis elegans, GI17506493, Length=426, Percent_Identity=26.9953051643192, Blast_Score=105, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17557151, Length=159, Percent_Identity=38.3647798742138, Blast_Score=96, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71988819, Length=148, Percent_Identity=34.4594594594595, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=35.3741496598639, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=695, Percent_Identity=42.7338129496403, Blast_Score=548, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=799, Percent_Identity=30.5381727158949, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6324707, Length=480, Percent_Identity=25.625, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=480, Percent_Identity=25.625, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=35.4838709677419, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=173, Percent_Identity=35.2601156069364, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24582462, Length=707, Percent_Identity=44.978783592645, Blast_Score=588, Evalue=1e-168, Organism=Drosophila melanogaster, GI221458488, Length=743, Percent_Identity=32.3014804845222, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24585709, Length=831, Percent_Identity=26.9554753309266, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24585711, Length=831, Percent_Identity=26.9554753309266, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI24585713, Length=831, Percent_Identity=26.9554753309266, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI21357743, Length=796, Percent_Identity=22.9899497487437, Blast_Score=125, Evalue=9e-29, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=34.4086021505376, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=4e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77582; Mature: 77451
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH GVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD CHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCC DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF CCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCC ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHH FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL HHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH SEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH GVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD CHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCC DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF CCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCEEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCC ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHH FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL HHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH SEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA