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The map label for this gene is gspH1 [H]

Identifier: 157162803

GI number: 157162803

Start: 3505811

End: 3506320

Strand: Direct

Name: gspH1 [H]

Synonym: EcHS_A3523

Alternate gene names: 157162803

Gene position: 3505811-3506320 (Clockwise)

Preceding gene: 157162802

Following gene: 157162804

Centisome position: 75.5

GC content: 55.88

Gene sequence:

>510_bases
ATGAATCAGCAACGCGGGTTTACCCTGCTGGAGATGATGCTGGTGCTGGCGCTGGTCGCTATCACGGCAAGCGTGGTGCT
CTTCACATATGGCCGGGAGGATGTCGCCAACACTCGTGCGCGCGAAACAGCGGCGCGGTTTACCGCTGCACTTGAATTAG
CCATCGACCGCGCCACGCTCAGTGGTCAGCCTGTCGGTATCCATTTCTCTGATTCAGCATGGCGCATTATGGTACCGGGC
AAAACACCATCAGCCTGGCGCTGGGTTCCATTACAAGAAGATGCCGCAGACGAGAGCCAAAATGACTGGGATGAAGAACT
CTCAATTCATCTTCAGCCATTTAAACCTGATGACAGCAACCAGCCACAGGTTGTGATTCTGGCCGACGGACAAATCACGC
CCTTCTCTTTGTTGATGGCTAACGCCGGGACCGGTGAGCCGCTCCTGACGTTAGTCTGTTCAGGCTCATGGCCCCTGGAT
CAAACGCTCGCCAGAGATACCCGCCCATGA

Upstream 100 bases:

>100_bases
GGTGCATACGATCTGCTTTCAGCAGGGCCCGATGGTGAAATGGGAACCGAGGACGACATCACCAACTGGGGTTTGAGCAA
GAAGAAAAAGTAAGTCAGCG

Downstream 100 bases:

>100_bases
ACAAACAATCAGGGATGACACTGCTTGAAGTCTTACTGGCGATGAGTATTTTCACCGCTGTTGCTCTGACTTTAATGAGC
AGTATGCAAGGGCAACGAAA

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Protein transport protein hofH [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPG
KTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLD
QTLARDTRP

Sequences:

>Translated_169_residues
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPG
KTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLD
QTLARDTRP
>Mature_169_residues
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPG
KTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLD
QTLARDTRP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

Organism=Escherichia coli, GI1789726, Length=169, Percent_Identity=99.4082840236686, Blast_Score=343, Evalue=5e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 18592; Mature: 18592

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVANTRARETAARFTAALELAIDRATL
CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHEEEHHCC
SGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSN
CCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
QPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
CCEEEEEECCCCCHHEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVANTRARETAARFTAALELAIDRATL
CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHEEEHHCC
SGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSN
CCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
QPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
CCEEEEEECCCCCHHEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 7896718 [H]