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The map label for this gene is gspC2

Identifier: 157162798

GI number: 157162798

Start: 3499921

End: 3500736

Strand: Direct

Name: gspC2

Synonym: EcHS_A3518

Alternate gene names: 157162798

Gene position: 3499921-3500736 (Clockwise)

Preceding gene: 157162764

Following gene: 157162799

Centisome position: 75.37

GC content: 42.28

Gene sequence:

>816_bases
GTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAG
CATAGGGTCTATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAA
ACGCATTTCAGTCTGATTTCAGCCTTGCCGCTTTATGGCGTAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTG
GCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGT
CTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGCGCCGGGAACGTTTATTAGAA
AAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATC
ATCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGAT
ATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCA
GGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAG
TTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGGGGAACTTACAGGAATGAATGGACTGCGTCA
TGAAAGGACTCAATAA

Upstream 100 bases:

>100_bases
ATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCT
ATTTTATTAGAACATACATC

Downstream 100 bases:

>100_bases
AATCACCTGCTGCTTGCTGGCAGCACTACTCATGCCTTGTGCAGGACACGCTGAGAACGAACAATACGGCGCGAACTTCA
ATAACGCCGATATCCGCCAG

Product: general secretion pathway protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPV
AVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI
IKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
FTIRRNGVPRLINVSVGELTGMNGLRHERTQ

Sequences:

>Translated_271_residues
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPV
AVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI
IKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
FTIRRNGVPRLINVSVGELTGMNGLRHERTQ
>Mature_270_residues
PTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVA
VNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDII
KQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQF
TIRRNGVPRLINVSVGELTGMNGLRHERTQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cell inner membrane (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP C family

Homologues:

Organism=Escherichia coli, GI1789721, Length=271, Percent_Identity=100, Blast_Score=551, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GSPC_ECOLI (P45757)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G65125
- RefSeq:   AP_004466.1
- RefSeq:   NP_417783.1
- ProteinModelPortal:   P45757
- SMR:   P45757
- STRING:   P45757
- EnsemblBacteria:   EBESCT00000000883
- EnsemblBacteria:   EBESCT00000000884
- EnsemblBacteria:   EBESCT00000000885
- EnsemblBacteria:   EBESCT00000015638
- GeneID:   947824
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3286
- KEGG:   eco:b3324
- EchoBASE:   EB2726
- EcoGene:   EG12889
- eggNOG:   COG3031
- GeneTree:   EBGT00050000012131
- HOGENOM:   HBG468271
- OMA:   HAHLENI
- ProtClustDB:   CLSK891802
- BioCyc:   EcoCyc:G7702-MONOMER
- Genevestigator:   P45757
- InterPro:   IPR001478
- InterPro:   IPR001639
- TIGRFAMs:   TIGR01713

Pfam domain/function: SSF50156 PDZ

EC number: NA

Molecular weight: Translated: 30039; Mature: 29907

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS01141 T2SP_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17aeb738)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDF
CCCCCCEEEECCCCCCCEEEEEEEEEECCHHEEEEEEEEEEEEECCEEECCCCHHHHCCC
SLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
NEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATP
HHHHHHCCCHHHEECCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCHHHHEEEEEECC
IRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
CCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCE
FTIRRNGVPRLINVSVGELTGMNGLRHERTQ
EEEEECCCCEEEEEEHHHCCCCCCCCCCCCH
>Mature Secondary Structure 
PTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDF
CCCCCEEEECCCCCCCEEEEEEEEEECCHHEEEEEEEEEEEEECCEEECCCCHHHHCCC
SLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
NEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATP
HHHHHHCCCHHHEECCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCHHHHEEEEEECC
IRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
CCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCE
FTIRRNGVPRLINVSVGELTGMNGLRHERTQ
EEEEECCCCEEEEEEHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503