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The map label for this gene is yhdN

Identifier: 157162767

GI number: 157162767

Start: 3483484

End: 3483852

Strand: Reverse

Name: yhdN

Synonym: EcHS_A3487

Alternate gene names: 157162767

Gene position: 3483852-3483484 (Counterclockwise)

Preceding gene: 157162768

Following gene: 157162766

Centisome position: 75.03

GC content: 47.97

Gene sequence:

>369_bases
ATGTGGTTACTTGACCAGTGGGCAGAGCGCCATATAGCAGAAGCGCAAGCGAAAGGTGAGTTTGATAACCTGGCAGGTAG
CGGCGAACCATTGATACTGGATGATGATTCTCACGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCCG
GTTGCTTACCGCCAGAACTTGAGCAACGGAGAGAAGCAATTCAGCTTCTGGATATTCTCAAAGGTATCCGTCACGATGAT
CCGCAATATCAAGAGGTTAGCCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTT
ACGCGGCGATTATGCTGACAAGTTGTTGGACAAAATCAACGATAACTAG

Upstream 100 bases:

>100_bases
GCAACGTAAAAAAACCCGCCCCGGCGGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTT
GTTCATCCCCTGGAGTATTT

Downstream 100 bases:

>100_bases
TGGAGTATGTATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAAC
AGCAGATGATGGAGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN

Sequences:

>Translated_122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN
>Mature_122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=122, Percent_Identity=100, Blast_Score=245, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDN_ECOLI (P36677)

Other databases:

- EMBL:   L29458
- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   I67893
- RefSeq:   AP_004497.1
- RefSeq:   NP_417752.1
- ProteinModelPortal:   P36677
- IntAct:   P36677
- STRING:   P36677
- EnsemblBacteria:   EBESCT00000002710
- EnsemblBacteria:   EBESCT00000017056
- GeneID:   947785
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3255
- KEGG:   eco:b3293
- EchoBASE:   EB1913
- EcoGene:   EG11970
- eggNOG:   NOG41331
- GeneTree:   EBGT00050000010004
- HOGENOM:   HBG496787
- OMA:   WAERHIL
- ProtClustDB:   PRK10203
- BioCyc:   EcoCyc:EG11970-MONOMER
- Genevestigator:   P36677
- InterPro:   IPR018961

Pfam domain/function: PF09350 DUF1992

EC number: NA

Molecular weight: Translated: 13945; Mature: 13945

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC
>Mature Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503