Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157162732
Identifier: 157162732
GI number: 157162732
Start: 3448083
End: 3448913
Strand: Direct
Name: 157162732
Synonym: EcHS_A3444
Alternate gene names: NA
Gene position: 3448083-3448913 (Clockwise)
Preceding gene: 157162731
Following gene: 157162733
Centisome position: 74.26
GC content: 47.29
Gene sequence:
>831_bases TTGAAATCATTATTCAATCGGTTAACGGGAAAAGCGGTTAGCCGGACAGCTTTCGTCGAACATCTTGGTCAGGAAGTTGT ACAACATCATCCAAACTGGAAAGTCATGATTTCGACTGACCATAAATTGATGCGCATTGATACGGGTCACCAAACGGTGG AAATCACCCTTGATGATGCCTACAAACGTTATCAAGCCGCACCAGACCCGCTGCAAGAAGTGGCTGCAGATATGCTGAAA CAGCTTGCAGAAATGCTGCCGACCGGGCGCTGTATTGTTCCGGTGATTAAAGAAAAAGCCTGGCTGGATACCGTTCGCCA ACAGCTTAGCCAGTATGAGTCTGATCCAGAGGTCCTCAACGCCTCGCTGGATTTTGCCTGGGAAGACTTTAACGATGAGT TAATTATCTTGTTTGCTGAAGATGGTAGCGAAACCATGCGCTATCTGATGCGCTACGAAGTGACCATTGACCGCGAAAAA GCCATCAGTAATTTGAAGCAAATATTGCCGGAAGTTACGGCTGAAATCGTTGATACAGGCGCAAACGATGGAAAAGTTGC CGTTATCTCCGCAGGGGGTACTTATGAGCCCAGTCTGATGCTCATTGACGATCTTTGGGTGCAATCACCCGATCCTGAAT GCGGCGACCTGTTAGTGACCGTTCCCTCCAGAGGAAAACTGTTTTTCACCCACAATGATCAGCCAGCAAATCTCAGTGCA TTACGACAGTTAACAGAACAATGCTTCCGTGAGGATGACCATCCTCTGACAACACAGATATTCATCCGCCGTAACGGTCA CTTTTATCCCTGGGTAGAAACCTTGCATTAA
Upstream 100 bases:
>100_bases GAAGTTTGCCGAGGCCATCATTAATAACCAGATCCAGGGTCGCACGCTGGTGAAGGTTAACTAACCATTTAGCAAGGAAT AATAAGAGAGGGAACTCATT
Downstream 100 bases:
>100_bases CGCAACCTCCGTCATGCTTGAAAAAGCTTGTCGGAGTATGTGATGAAAACTGCAAACTCACCGAAGCCGATTTTGCTACC AAATCGGCTTTTTTATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTGHQTVEITLDDAYKRYQAAPDPLQEVAADMLK QLAEMLPTGRCIVPVIKEKAWLDTVRQQLSQYESDPEVLNASLDFAWEDFNDELIILFAEDGSETMRYLMRYEVTIDREK AISNLKQILPEVTAEIVDTGANDGKVAVISAGGTYEPSLMLIDDLWVQSPDPECGDLLVTVPSRGKLFFTHNDQPANLSA LRQLTEQCFREDDHPLTTQIFIRRNGHFYPWVETLH
Sequences:
>Translated_276_residues MKSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTGHQTVEITLDDAYKRYQAAPDPLQEVAADMLK QLAEMLPTGRCIVPVIKEKAWLDTVRQQLSQYESDPEVLNASLDFAWEDFNDELIILFAEDGSETMRYLMRYEVTIDREK AISNLKQILPEVTAEIVDTGANDGKVAVISAGGTYEPSLMLIDDLWVQSPDPECGDLLVTVPSRGKLFFTHNDQPANLSA LRQLTEQCFREDDHPLTTQIFIRRNGHFYPWVETLH >Mature_276_residues MKSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTGHQTVEITLDDAYKRYQAAPDPLQEVAADMLK QLAEMLPTGRCIVPVIKEKAWLDTVRQQLSQYESDPEVLNASLDFAWEDFNDELIILFAEDGSETMRYLMRYEVTIDREK AISNLKQILPEVTAEIVDTGANDGKVAVISAGGTYEPSLMLIDDLWVQSPDPECGDLLVTVPSRGKLFFTHNDQPANLSA LRQLTEQCFREDDHPLTTQIFIRRNGHFYPWVETLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31483; Mature: 31483
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTGHQTVEITLDDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEECHH YKRYQAAPDPLQEVAADMLKQLAEMLPTGRCIVPVIKEKAWLDTVRQQLSQYESDPEVLN HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHEE ASLDFAWEDFNDELIILFAEDGSETMRYLMRYEVTIDREKAISNLKQILPEVTAEIVDTG CHHCEEEECCCCCEEEEEECCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCC ANDGKVAVISAGGTYEPSLMLIDDLWVQSPDPECGDLLVTVPSRGKLFFTHNDQPANLSA CCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHH LRQLTEQCFREDDHPLTTQIFIRRNGHFYPWVETLH HHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHCCC >Mature Secondary Structure MKSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTGHQTVEITLDDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEECHH YKRYQAAPDPLQEVAADMLKQLAEMLPTGRCIVPVIKEKAWLDTVRQQLSQYESDPEVLN HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHEE ASLDFAWEDFNDELIILFAEDGSETMRYLMRYEVTIDREKAISNLKQILPEVTAEIVDTG CHHCEEEECCCCCEEEEEECCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCC ANDGKVAVISAGGTYEPSLMLIDDLWVQSPDPECGDLLVTVPSRGKLFFTHNDQPANLSA CCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHH LRQLTEQCFREDDHPLTTQIFIRRNGHFYPWVETLH HHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA