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The map label for this gene is yraP

Identifier: 157162635

GI number: 157162635

Start: 3347335

End: 3347910

Strand: Direct

Name: yraP

Synonym: EcHS_A3342

Alternate gene names: 157162635

Gene position: 3347335-3347910 (Clockwise)

Preceding gene: 157162634

Following gene: 157162638

Centisome position: 72.09

GC content: 54.34

Gene sequence:

>576_bases
ATGAAGGCATTATCGCCAATCGCAGTCCTTATTTCCGCGCTGCTGTTGCAAGGTTGTGTTGCCGCTGCCGTAGTGGGTAC
CGCTGCTGTGGGTACCAAAGCCGCAACTGACCCACGCAGTGTCGGCACCCAGGTGGACGATGGTACCCTGGAAGTGCGCG
TGAACAGCGCATTGTCGAAAGACGAACAGATTAAGAAAGAAGCGCGCATTAATGTAACGGCCTATCAGGGCAAAGTGCTG
CTGGTTGGGCAGTCACCAAATGCTGAACTTTCGGCTCGCGCCAAACAGATTGCTATGGGCGTAGACGGTGCCAACGAAGT
GTATAACGAGATTCGTCAGGGCCAGCCGATTGGTCTGGGCGAAGCATCTAACGATACGTGGATCACCACCAAAGTGCGTT
CGCAGCTCTTAACCAGCGACCTGGTGAAATCGTCCAACGTGAAAGTGACCACCGAAAACGGTGAAGTGTTCCTGATGGGG
CTGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTT
TACGTTTATTAAATAG

Upstream 100 bases:

>100_bases
TAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACC
AGGATGATTAAGGAGAATAC

Downstream 100 bases:

>100_bases
CAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGC
GTTTACGCCGCATCCGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK

Sequences:

>Translated_191_residues
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK
>Mature_191_residues
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains

Homologues:

Organism=Escherichia coli, GI1789540, Length=191, Percent_Identity=100, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRAP_ECO57 (P64598)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B85978
- PIR:   G91132
- RefSeq:   NP_289726.1
- RefSeq:   NP_312058.1
- ProteinModelPortal:   P64598
- EnsemblBacteria:   EBESCT00000026053
- EnsemblBacteria:   EBESCT00000056816
- GeneID:   916131
- GeneID:   959254
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4509
- KEGG:   ecs:ECs4031
- GeneTree:   EBGT00050000010001
- HOGENOM:   HBG664270
- OMA:   IVRGINN
- ProtClustDB:   PRK11023
- BioCyc:   ECOL83334:ECS4031-MONOMER
- InterPro:   IPR007055
- InterPro:   IPR014004
- SMART:   SM00749

Pfam domain/function: PF04972 BON

EC number: NA

Molecular weight: Translated: 20028; Mature: 20028

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50914 BON; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
DEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLG
HHHHHHHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHH
KRVTTAFTFIK
HHHHHHHHCCC
>Mature Secondary Structure
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
DEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLG
HHHHHHHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHH
KRVTTAFTFIK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796