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The map label for this gene is yraK

Identifier: 157162630

GI number: 157162630

Start: 3342267

End: 3343358

Strand: Direct

Name: yraK

Synonym: EcHS_A3337

Alternate gene names: 157162630

Gene position: 3342267-3343358 (Clockwise)

Preceding gene: 157162629

Following gene: 157162632

Centisome position: 71.98

GC content: 47.8

Gene sequence:

>1092_bases
ATGAAAAGAGCGCCTCTTATAACAGGACTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGC
CGATAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGAC
GGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTT
GTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAA
AACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAA
AAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATT
GGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGT
CATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGG
GAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGATGTTATTAAGGTTAATTTTGGATTCATCAATGGTCAG
AAGTTTACCACCCGCAATGCCATGCCAGACGGTTTTACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTC
AAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAA
GAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCAGAAC
GGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCT
GGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAA

Upstream 100 bases:

>100_bases
CAGGCAGATCAACAATGTCAGTTTGCTTTTAGTACACCGGATTCAGAACCCACAACCTCTGTATTACAAGGCACGGCGCA
GTGCCATTAAGGATAAAAAA

Downstream 100 bases:

>100_bases
AAGAAGACGTTGCGTTTTGATTAACGCAACGCTTCGGCACTGTTACCCCTGCTGCTCCAGCGCATACTTATACAGCGCAT
TTTTCTTCACGCCGTGAATT

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR

Sequences:

>Translated_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
>Mature_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI1789534, Length=363, Percent_Identity=100, Blast_Score=739, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRAK_ECOLI (P43319)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E65104
- RefSeq:   AP_003690.1
- RefSeq:   NP_417614.1
- ProteinModelPortal:   P43319
- SMR:   P43319
- STRING:   P43319
- EnsemblBacteria:   EBESCT00000004314
- EnsemblBacteria:   EBESCT00000017212
- GeneID:   947654
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3114
- KEGG:   eco:b3145
- EchoBASE:   EB2629
- EcoGene:   EG12776
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008278
- HOGENOM:   HBG467340
- OMA:   TQIKSST
- ProtClustDB:   CLSK891797
- BioCyc:   EcoCyc:G7640-MONOMER
- Genevestigator:   P43319
- GO:   GO:0009289
- InterPro:   IPR008966

Pfam domain/function: SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 38536; Mature: 38536

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTT
ECCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCC
DQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECEEEEEEECCEEEEECCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITV
CCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
IVR
EEC
>Mature Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTT
ECCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCC
DQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECEEEEEEECCEEEEECCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITV
CCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
IVR
EEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503